Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A2823 |
Symbol | |
ID | 4003183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 1817878 |
End bp | 1819779 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637946802 |
Product | ribosomal large subunit pseudouridine synthase B |
Protein accession | YP_558192 |
Protein GI | 91782986 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACACATA CCCACGACAC CGATTCGTCC GAATCCGAGC GCGCCGTGCC ATCGGCTCGC GCCGACGAAA CGCGCACCAC TCAAGCGTCG GCAGGCGAGG GCGAGCGCCC GGCGCAGACC ACGGAAGCAG ACGGTGAAGA CCGTCCGCGC CGCGGCCTGC GTCGCGGGCC GCGCAGCCTG ATCGCGCGGC GCCGCGCCGG CGCGAAGACG AAGGGCGCCG AAGGCGCCGC CGCGCAGGAG GCGCCGGTTG TCGGCGAGGC GCCACCGGAT GGCGAGGTCG TCGCGCAAGT GCGTATGCCG CGCAAGGATG CAGGCGCCAA GGGTCAGGGA TCGCGGCGCA ATGCAGGCGG CGCGCGCCGC GAAGGCGCGC CGCGTGAAGG TGCCGCACGT GAAGGCGCAC CTCGCGAAGG CCAGCGCGAG CGTCAGCCGC GTGAAGGTCA GCCGCGCGAA GGCGGCCAGC GTCAGAATCG CCGCGGCGGT GAAGCGCCGG CGGTTGCGAC GGAGGCGGGT CAGGACGATC TGTTCTCGTA CGTCACGTCG CCCGCCTTCG ACGCGGACAA CAGCGCCACC GGCGGCGTGC GCGCTCCGAT GCTGCGTCGT GGCAAGCCGG TCGCGCCCAA GCGCGTACTC GCCGCGGACG ACGACGCACC AAAGCTGCAC AAAGTGCTGG CCGAAGCCGG CATGGGTTCG CGCCGCGACA TGGAAGAGCT GATCGTTGCC GGCCGGGTGT CGGTGAATGG CGAGCCGGCT CATATCGGCC AGCGCATCAT GCCGACCGAC CAGGTTCGCA TCAACGGCAA GCCGGTCAAG CGCAAACTGG CCAGCAAGCC GCCGCGTGTG CTGCTGTATC ACAAACCGAC CGGCGAAATC GTCAGCCATG CCGATCCGGA AGGCCGTCCT TCGGTGTTCG ACAAGCTGCC GCCGATGAAA ACCGCCAAGT GGCTCGCGGT CGGCCGTCTC GATTTCAACA CGGAAGGTCT GCTGATGCTG ACCACGTCGG GCGATCTGGC GAACCGTTTC ATGCACCCGC GTTATAGCGT CGAGCGTGAA TATGCGGTGC GCGTGGTCGG CGAACTGGCC GAAGGCATGC GTCAGAAGCT TCTGCATGGC GTCGAGCTGG ACGACGGCCC GGCGAACTTC CTGCGGATTC GCGACGGCGG CGGCGAAGGC ACCAATCACT GGTATCACGT CGCGCTCGCC GAAGGGCGTA ACCGCGAAGT GCGTCGTATG TTCGAAGCGG CCGGCCTGAT GGTCAGCCGC CTGATCCGTA CCCGTCACGG CCCGATCTCG CTGCCCAAGG GGCTCAAGCG CGGTCGTTGG GAAGAGTTGG AAGACAACCA GGTGCGTGCA CTGATGGCGT CGGTGGGCCT GAAGGCGCCG ACTGAAGAGC GCGGCAGCCG CAATGCGGCG CCGGAACGCA AGCAGCCGGA TCCGATGCAA ACGTCGATGG GTTTCATTAA CCGTGAGCCG GTGTTGATGT CGCATGGCCG TTTCGATCAG CAGCCGCCAC GCGGCCAGGG GCGGCGCGGT GGTGCGGCAG GCGGCGGTTT TGCTGGCGGC GCGGGCGCGG GTTTTGGCGG CGGCTATGGC AATCGCGGTG CCGGCCGCAG CGCCGGTGGC TTCGGCGGCC CGATGGGCGC GGGTGGGGGT GCGGGCGGCC CGCGTGGCGG CCGTGAAGTC GACGGCAACC GCGCGCCGTC GGGCAATGGC AATCGTGCGG CAGGCGGCGG CAAGCGTGTC GGCGGTGCCG GTGCCGGTGC CAATCCGGGC AATGGCGGCA ACAACCGCGG CCCGGCCGGC AATCGGGGCG GCAACGCCAA TCGCGCGGGC GGCGGAAACG CCAGTCCGGG CGGCGCCAAT CGCGGCGGCG GCGCACCGCG CGGCCGTTCG CGTGGCCGTT GA
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Protein sequence | MTHTHDTDSS ESERAVPSAR ADETRTTQAS AGEGERPAQT TEADGEDRPR RGLRRGPRSL IARRRAGAKT KGAEGAAAQE APVVGEAPPD GEVVAQVRMP RKDAGAKGQG SRRNAGGARR EGAPREGAAR EGAPREGQRE RQPREGQPRE GGQRQNRRGG EAPAVATEAG QDDLFSYVTS PAFDADNSAT GGVRAPMLRR GKPVAPKRVL AADDDAPKLH KVLAEAGMGS RRDMEELIVA GRVSVNGEPA HIGQRIMPTD QVRINGKPVK RKLASKPPRV LLYHKPTGEI VSHADPEGRP SVFDKLPPMK TAKWLAVGRL DFNTEGLLML TTSGDLANRF MHPRYSVERE YAVRVVGELA EGMRQKLLHG VELDDGPANF LRIRDGGGEG TNHWYHVALA EGRNREVRRM FEAAGLMVSR LIRTRHGPIS LPKGLKRGRW EELEDNQVRA LMASVGLKAP TEERGSRNAA PERKQPDPMQ TSMGFINREP VLMSHGRFDQ QPPRGQGRRG GAAGGGFAGG AGAGFGGGYG NRGAGRSAGG FGGPMGAGGG AGGPRGGREV DGNRAPSGNG NRAAGGGKRV GGAGAGANPG NGGNNRGPAG NRGGNANRAG GGNASPGGAN RGGGAPRGRS RGR
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