Gene Bxe_A2784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A2784 
Symbol 
ID4004990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp1865260 
End bp1865790 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content66% 
IMG OID637946841 
Productsigma-24 (FecI) 
Protein accessionYP_558231 
Protein GI91783025 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.313744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTTCG AAGCTGAAGT GATTTCGTGG CTCCCGCAGT TGCGCCGCTA CGCGCGCGCA 
CTGACGGGCG ACCGCGCCTG GGCCGACGAC CTCGTGCAGG ATACGGCGGA GCGGGCGTTC
GCGCGCTGGG CGGCGTTCCG GCCGGACAGC AATCTGCGCG CATGGCTGCT GACGATCCTG
CGGCATCTCT ATATCGACCA GTTGCGCGGC CGCCGCGAGA TTGCCGTCGA CGACGAAAGC
GCGCCGTGGC GCAACCTCGA AGCGCCTCAG GGCGAAGTGG ACGGCCTCGT GCTGCGCGAT
CTGCAGCGCG CGCTGTATTG TCTGCCGGTC GAACAGCGCG AAGTGCTGTT GCTGGTCTGC
GTGGAGGAAT TGTCTTATCA GGAAGCGTCG AGCGCGCTCG GCGTGCCGAT CGGCACGGTC
ATGTCGCGGC TGTCGCGCGC GCGAGAACAC ATGCGCGCGT TGCTGACGGA GGGACCGGCC
GAGGGGCCGG CGCGTAAAAC TACGCCGTTA AAAGTAGTGA GAAATCCGTG A
 
Protein sequence
MNFEAEVISW LPQLRRYARA LTGDRAWADD LVQDTAERAF ARWAAFRPDS NLRAWLLTIL 
RHLYIDQLRG RREIAVDDES APWRNLEAPQ GEVDGLVLRD LQRALYCLPV EQREVLLLVC
VEELSYQEAS SALGVPIGTV MSRLSRAREH MRALLTEGPA EGPARKTTPL KVVRNP