| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2677 |
|---|
| Symbol | |
|---|
| ID | 4005463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 1977908 |
|---|
| End bp | 1978645 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637946946 |
|---|
| Product | putative short-chain dehydrogenase/oxidoreductase |
|---|
| Protein accession | YP_558336 |
|---|
| Protein GI | 91783130 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.334903 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGACG AACAACAGAA GAAAATCGCG TTGGTTACCG GGGCGACCCG GGGTCTCGGA
TTTGAGACGG TGCGCCAACT CGCGGCAAGC GGGGTGCGTG TACTGCTTGG TGCACGAGAC
ACCCATGCGG GAGAAGCGAA AGCTGCGGAA CTGCGTGCCG AGGGGCTTGA TGTTCGGCCC
ATCGCTATCG ATTTGAATAA TGCCGCTACC TTCGATCAGG CTGCCAAAGA AATTGATGCC
CTGTTTGGCC GTCTGGACAT CCTCGTGAAC AATGCAGGTG TGATGTCCGA CGCAGATGGT
TTTCCCAGCG TCGCGAATCC CCAGGCGATG CGTGACGTTA TCGAAATCAA TTTCATCGCA
ACCGTCATCG TCACGCAGAA CATGCTTCCC CTGCTGAGGA AATCGAAACA TGGGCGTATC
GTCAATGTTT CGAGCAGGGT CGGGTCACTG TGGTGGAATA GTGATCCGGA CAACCCCGTC
CCGGACAATA AATGGCTTGG TTATGCCGCA TCCAAGGCAG CGGTAAACAT GTTGACCGTC
GAACTTGCCT ACGAGTTGCG CGATACCCCT ATCAAGGTGA ATGCCATCTG CCCGGGCTAT
GTGAAGACAG AAATGAACAA GGGAGGCGGT TTCCTGACGA TCGAAGAGGG CGCGCGCCCC
GCCGTTCACT ATGCACTTAT TGGCGATGAC GGCCCTACGG GTGGTTTCTT CGGTGGCGAC
GGACCGATCG CCTGGTGA
|
|---|
| Protein sequence | MSDEQQKKIA LVTGATRGLG FETVRQLAAS GVRVLLGARD THAGEAKAAE LRAEGLDVRP
IAIDLNNAAT FDQAAKEIDA LFGRLDILVN NAGVMSDADG FPSVANPQAM RDVIEINFIA
TVIVTQNMLP LLRKSKHGRI VNVSSRVGSL WWNSDPDNPV PDNKWLGYAA SKAAVNMLTV
ELAYELRDTP IKVNAICPGY VKTEMNKGGG FLTIEEGARP AVHYALIGDD GPTGGFFGGD
GPIAW
|
|---|
| |