| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2654 |
|---|
| Symbol | |
|---|
| ID | 4005583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 1997476 |
|---|
| End bp | 1998645 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637946967 |
|---|
| Product | putative type IV secretion system protein VirB6/TraH |
|---|
| Protein accession | YP_558357 |
|---|
| Protein GI | 91783151 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.254116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCC TCTTTACCGC CGTTGGCGGC ACCCTCGAAA ACGGCATGTC GACCTACGTC
ACGAACGTGT CGTCGGCCCT CTCTGGCGCG CTTGTGCCCG TCGTTACCAC GGCCGTCACG
GTCTGGGTAC TCGCCTATGG TCTTGCGGTG GTGCGCGGCG AAGCTCACGA GGCGGTGCCG
GCTTTTGCCT GGCGGGGGCT GAAAGTCGCG ATCACGCTCG CATTCGCGCT CAGCACTGGT
CTCTATCAGC AGCAGGTCGT TACCGCAGTC AACGGCGCCA CGTCCGGGCT CGCACAGACG
ATCCAGAACG CGGCGAACAC GACAGGTGGC GGCAATCCGG GTTGCGGCTC CGTCAACGGT
GGCAGCGTGA CAGGGCAGGG CGCGGCGACC AGCATCTACC AGACGCTCGA CTGCTATGAC
CAGCAGATTG ATCTCGTGAT GGATGCCTAC TTCGACAAGG CGACGCATGA AGGATTCAGT
CCGAGTGGTC TGGCCGCAGC CATTGGCGAT TTCCTGTGCG GCCTGGTGGC AGCGCTCGGC
GGCTCGATCT TCCTGATCGT TCTCGCGTTC GAAGTGGTGA TGGCGCGCAT GCTGCTCGAT
CTTGTGCTCG GCCTCGGTCC GATTTTCATC GCCTGCGCCG CATTCGCACC GACCGCACGC
TTTTTCGAGG CGTGGACCGC GAAGGTTGCC AATTACGCGT TGCTGCAGGT ACTCGTTGCC
GCCTTCCTCG GCATGGCGCT CACGGCGTTC TCCGCTGATC TCACCGCACT TCATGCTACG
GGCGGCACAC CCGGCGCCGA TGCGTCGGCA CTCGTGCAAA CCATTTCCGC ATCCCTGGAC
GACGCCGCAG CCGCTGCCGC GGCGATTGGC CTGTTCGCAA CCGGCGTGTT CCTCGCGATG
GTGGGCTGGC AGTTGCCGTC CGTCGCAGCG GGCCTGTCCG GCGGCGCAAC CCTGTCTGGC
TTCGGTGCAT TCGTGGCGGG CCTGGCCTCG CGGCACCTGG TGACCGCGAT CGGCCGGGCG
ATCAGCGGCA GCGGGAAGGG GCCACGGCCG GGTGGCGAGA TTCGGGACCG CACTGGTTCA
GGTGGCGGAT CAGGTGGTGG ATCGGGCAGC GGTGCGATGC CGGCTTATCA GCGCGCCTCG
CGCGCGAACC TGGGCCGGCA GGGCGAATGA
|
|---|
| Protein sequence | MSGLFTAVGG TLENGMSTYV TNVSSALSGA LVPVVTTAVT VWVLAYGLAV VRGEAHEAVP
AFAWRGLKVA ITLAFALSTG LYQQQVVTAV NGATSGLAQT IQNAANTTGG GNPGCGSVNG
GSVTGQGAAT SIYQTLDCYD QQIDLVMDAY FDKATHEGFS PSGLAAAIGD FLCGLVAALG
GSIFLIVLAF EVVMARMLLD LVLGLGPIFI ACAAFAPTAR FFEAWTAKVA NYALLQVLVA
AFLGMALTAF SADLTALHAT GGTPGADASA LVQTISASLD DAAAAAAAIG LFATGVFLAM
VGWQLPSVAA GLSGGATLSG FGAFVAGLAS RHLVTAIGRA ISGSGKGPRP GGEIRDRTGS
GGGSGGGSGS GAMPAYQRAS RANLGRQGE
|
|---|
| |