Gene Bxe_A2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A2652 
Symbol 
ID4005585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp1999582 
End bp2000286 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content64% 
IMG OID637946969 
Productputative type IV secretion system protein VirB8/TraJ 
Protein accessionYP_558359 
Protein GI91783153 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3736] Type IV secretory pathway, component VirB8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0159035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CGCACGACTA CGGGCGTGTG CTCGACATCG AGACGTCGCT CACTCACCTG 
CAGGAACGCT CCGAGCGGCG GGCCTGGCAC GTCGCCTATG CAGCGGTCGG CGTGGCCGTG
CTCAGTACCG CAGCACTCGC GGTGATGGTG CCGTTCTATC GCGTCGTGCC GCTGCCGATC
GAGGTCGATC GCCTGACGGG TGAGTCTCAG GTCATCGATG TGCTCGATGC CCACCATGTG
CATACGAAGG AAATCCAGGA CAGGCACTGG GTCGAGACCT ATGTGCGTGC GCGCGAGCGT
TACGACTGGG GCCTGCTGCA GATGGACTAC GACAACGTGC TCACCATGAG CGATGACGTG
GTCGCGCGCG ATTACCGCGG CACCTACAGC GGTCCCGACG CGCTGGACCG GCAACTGGGG
TCCGGCGCCG AGCGGCGTGT TCGCATTCTC TCAATCACGC TGCCGCCAGA CGAACCGGGT
CACGCGGTCG TGCATATCGA GCGCACATCG TTCAGGAACG GCCAGGCCGA CGCCGAGCCG
ACGCAGCGTT TCGTGATCAC GTTGGCCTAT ACCTATCAGC CATCCGTGTT CACGCGCGAG
AGCGTGGCCA TTGCCAATCC GTTCGGATTC AAGGTCACGG CCTACAGCCG CGATCCCGAA
TACACGCCGC AGGCGTCGGC GTCGAATGCC GGAGTTAAGC CATGA
 
Protein sequence
MSAPHDYGRV LDIETSLTHL QERSERRAWH VAYAAVGVAV LSTAALAVMV PFYRVVPLPI 
EVDRLTGESQ VIDVLDAHHV HTKEIQDRHW VETYVRARER YDWGLLQMDY DNVLTMSDDV
VARDYRGTYS GPDALDRQLG SGAERRVRIL SITLPPDEPG HAVVHIERTS FRNGQADAEP
TQRFVITLAY TYQPSVFTRE SVAIANPFGF KVTAYSRDPE YTPQASASNA GVKP