| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2393 |
|---|
| Symbol | |
|---|
| ID | 4003542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 2261018 |
|---|
| End bp | 2262232 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637947244 |
|---|
| Product | putative transmembrane lipoprotein |
|---|
| Protein accession | YP_558628 |
|---|
| Protein GI | 91783422 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.951834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.103299 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGAC TCGCCTTTTC GCTGCTGACC GTTCTGCTGC TCGCCGCCTG TGCCGGCGCG
CCGCAAAAGA CGTCGTCGCG CGGCTCGGGC AGCGGGATCG TGGTGGCGAA CGGCGCTTAT
CACGCTCCGC CGCCCGGGTT TCCGAACTTC GTCGATCACA GCATCGGCCG TGAGGAAATC
TCGATTCAGG CGATGAGCCT CGTCGGCATT CCATACCGCT GGGGTGGCAA TACGCCGGAT
AGCGGCTTCG ATTGCAGCGG ATTGGTACGC TATGTGGTTT CGCGCGCGGC TTCCGTGAAT
CTGCCGCGCA CGACGGCGGA CATGAGCGGG CGCGGCGAGT CGATAGAACC GGACGAGATC
GCGCCGGGCG ATCTGATTTT CTTCAACACG ACGGGGCGCG CGCATTCGCA TGTCGGTATT
TATGTGGGCA AGCTGCGCTT CGTCAACGCG CCGTCGACCG GCGGTACGGT GCGGCTCGAC
TATCTGACCA ATCCGTATTG GGCCAAACGC TTCGACGGCA TTCGTCGGGT GGCCGCGCCG
GCTGCAACGC CAACGCCGTT CGATACGCCG AGCTATCAGG CCGCGGCGCC GCAGCCTGAG
CGCGTCGCGC CGGTGGTGCA GACAACCCCG GCATACGCGG GTGCGGCGGG CACGACGGCG
GCCGTGGCGG CGCCGCCCTC GGCGAAGACA GCGGCACAAC CGCCGGTCTA TGCCGCAGGT
GCGCTGCAAC CCCAATCCCA GCCGCAGCAG ACGGCCCGAG TTGCGGCGGC GCCTCGCGCG
CCTTTGACCG CGGAGGCTCA GCCGCTCACG GCATCGGCAC AAGCTGATCC GTTCGAGCCG
CCACCGCCCG CCATGAGCGC CGCGCAGATC CAGGCGCGTG CGGCTGGCGC AGTATCGCCG
GCGCCGGTTG CTGGCGCTCA GGTCAGCGCT TACGACAGCA ACGCCGGCTC GATGGCGCAA
CAACAACCGG CCGCTTCACG CGGCGCGGCG CAAACAGCGG CCGTCCGCGC GCCCGATCCT
ATCGACGCGG CAGCCGACGC GTTCGAACCG CCGCCGCCCG CCGCCGTCGC CGCACGCCAG
GCCCGGCAGG CGCAGCAAGC CGATGAAAGC GGCAACGTGC AGATCATGCG GGCTTCCACG
GCGTCGCGCG GCATGCCCGC TCCCACGCAA ACCAACGACG ACCCGATCGC CCGCTTCGCC
AACGGCAACT TCTGA
|
|---|
| Protein sequence | MRRLAFSLLT VLLLAACAGA PQKTSSRGSG SGIVVANGAY HAPPPGFPNF VDHSIGREEI
SIQAMSLVGI PYRWGGNTPD SGFDCSGLVR YVVSRAASVN LPRTTADMSG RGESIEPDEI
APGDLIFFNT TGRAHSHVGI YVGKLRFVNA PSTGGTVRLD YLTNPYWAKR FDGIRRVAAP
AATPTPFDTP SYQAAAPQPE RVAPVVQTTP AYAGAAGTTA AVAAPPSAKT AAQPPVYAAG
ALQPQSQPQQ TARVAAAPRA PLTAEAQPLT ASAQADPFEP PPPAMSAAQI QARAAGAVSP
APVAGAQVSA YDSNAGSMAQ QQPAASRGAA QTAAVRAPDP IDAAADAFEP PPPAAVAARQ
ARQAQQADES GNVQIMRAST ASRGMPAPTQ TNDDPIARFA NGNF
|
|---|
| |