| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2256 |
|---|
| Symbol | |
|---|
| ID | 4003628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 2420520 |
|---|
| End bp | 2421932 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637947384 |
|---|
| Product | Alpha,alpha-trehalose-phosphate synthase(UDP- forming) |
|---|
| Protein accession | YP_558765 |
|---|
| Protein GI | 91783559 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0380] Trehalose-6-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.16196 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCGAT TGATCGTCGT GTCGAATCGC GTCGCAACGC CGACGGAAAC CAAGGGATCG
GCCGGCGGCC TCGCGGTCGG CGTATTCGGC GCGCTGAAGG ATGCCGGAGG CGTGTGGTTC
GGCTGGAGCG GCGACGTGGT CAGCGAGACC GTCGCGAACG CCGGTCCGAC GCTGGAGCAG
GACGGCGCGG TGACCTTCGC GACCGTAGGG CTCACGCGCA AGGATTACGA CCAGTACTAT
CGCGGCTTTT CGAACGCGAC ATTGTGGCCG GTGTTCCACT ACCGCAACGA CCTCGCGCGC
TACGAGCGCG AGGAATACAC GGGCTACCGG CGCGTCAACG CGTGGCTCGC GCACAAGCTG
ATCAAGCTGC TCGAACCCGA CGACGTGATC TGGATTCACG ACTACCACCT GATCCCGTTC
GCCGAGGCGC TGCGCAACGA GGGTGTCACG AACCGCATCG GCTTCTTCCT GCACATTCCG
TTTCCCGCGC CGCAGATCCT GCTCAACATT CCGCCGCACG AGGAACTGGT GAAGTCGCTG
TCGTGCTACG ACCTGCTGGG CTTCCAGACC GCCACCGACG AACTCGCGTT CAAGGATTAC
GTCACGCGCC ACGCGCGCGG CACGGTGAGT GCGGACGGTC TCGTCGAAGC GTTCGGCCGC
AAGCTGCGCA CCGGCGTCTA CCGGATCGGC GTGTTCCCCG ACGAAATCGC CGAGCAGGCG
AAGCGCTACG AAAGCCGTCA GCACGTGCTC GACCTGAAGC AGAGCCTGGA AGGGCGCAAG
CTGATCATGA GCGTCGACCG GCTGGACTAT TCGAAGGGAC TGGTCGAGCG GTTCCGGGCC
TTCGAGCATC TGCTGGAGCG CTCGCCGGAA TGGCGCGGCA ACGTCACGCT GGTGCAGATC
GCGCCGCCCA CCCGTTCGGA CGTCGCCACC TATCAGAAGA TTCGCCAGGA TCTGGAGTAC
GAAGCGGGGC GCATCAATGG CCGCTACTCG GGTCTCGACT ACACGCCGAT CCGCTATCTG
AATCAGCAGT ACGACCGCTG GAAGCTGATG TCGCTGTTTC GCGAATCGCA GATCGGTTTC
GTCACGCCGC TGCACGACGG TATGAATCTG GTCGCGAAGG AATACGTCGC CGCGCAGAAT
CCCGACGATC CCGGCGTGCT GGTGCTGTCG ATTTTCGCGG GTGCGGCGGC GGAGCTGAGC
GGCGCGCTGC TCGTCAATCC ACATGATGCG ATCGGCATGT GCGAAGCCTT GCAGCGCGCG
TTGCAGATGC CGCTCGACGC ACGTCAGCGG CGCCATGAAA TCAACATGGC CGCGCTGCGC
AAGAACGATC TCGGCGTGTG GCGCGACACG TTCCTGCACG ATCTGCGCAG CGTGCCGGTG
CAGCAGCCAG GCAAGGGTGG CGGGCATAAC TGA
|
|---|
| Protein sequence | MGRLIVVSNR VATPTETKGS AGGLAVGVFG ALKDAGGVWF GWSGDVVSET VANAGPTLEQ
DGAVTFATVG LTRKDYDQYY RGFSNATLWP VFHYRNDLAR YEREEYTGYR RVNAWLAHKL
IKLLEPDDVI WIHDYHLIPF AEALRNEGVT NRIGFFLHIP FPAPQILLNI PPHEELVKSL
SCYDLLGFQT ATDELAFKDY VTRHARGTVS ADGLVEAFGR KLRTGVYRIG VFPDEIAEQA
KRYESRQHVL DLKQSLEGRK LIMSVDRLDY SKGLVERFRA FEHLLERSPE WRGNVTLVQI
APPTRSDVAT YQKIRQDLEY EAGRINGRYS GLDYTPIRYL NQQYDRWKLM SLFRESQIGF
VTPLHDGMNL VAKEYVAAQN PDDPGVLVLS IFAGAAAELS GALLVNPHDA IGMCEALQRA
LQMPLDARQR RHEINMAALR KNDLGVWRDT FLHDLRSVPV QQPGKGGGHN
|
|---|
| |