| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2197 |
|---|
| Symbol | |
|---|
| ID | 4004569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 2489734 |
|---|
| End bp | 2492250 |
|---|
| Gene Length | 2517 bp |
|---|
| Protein Length | 838 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637947443 |
|---|
| Product | putative penicillin-binding 1 (peptidoglycansynthetase) transmembrane protein, MrcA |
|---|
| Protein accession | YP_558824 |
|---|
| Protein GI | 91783618 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.633683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00350534 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGCC TGATCCCCTC ATTGCTGGAG ACCCTTGAAA AAGGGCTGAC CCTGGCGAAC
CCGCTGATCG CCCAGGCCCT GTGGCACTTG CGCCATCCGA CCCGGCGCGG CGTGCTGAAG
GCCTGCGCCG CGCTTCCGCT GCTGTTCGTC CTGTATGTGC TGATCCTGAT TCCGTTCACG
CCGGGCATCG GCGACATCCG CAAGGCCAAG GTCGAGCAGC CGGCGCAGAT CCTGTCGGCG
GACGGCAAGC TGCTGGCGGA ATTCAAGCCC TCCAACCGCG AGTGGGTCAA ACTCAGGGAC
ATCTCGCCGA ACGTGGTAAA CGCGCTGATC GCCACCGAAG ATCACCGTTT CTACCAGCAT
TGGGGCCTCG ACTGGCGGCG CACCGCCTCG GCCGCGCTGC ATACGTTTTC CGGCGACCGG
CAGGGCGGCT CGACCATCAC CCAGCAGCTC GCCCGCAATC TTTATCCCGA CGAGATCGGC
CGCGCGCCGA CGCTCACGCG CAAGCTCAAG GAAGCGATCA CCGCCTTCAA GATCGAGGCG
CTCTACACCA AGGACGAGAT TCTCGAGACT TACCTGAACA CGGTGCCGTT CCTCTATAAC
GCGTACGGCA TCGAGATGGC GGCCCGCACC TATTTCGACA AATCGGCCTC CGATCTGACC
GTGCTGGAAA GCGCCACGCT CACCGGCATG CTGAAAGGCA ATAGCTACTA CAACCCGGTG
CTGAACCCCG AACGCGCGTT GCAGCGGCGC AATACGGTGC TCGGCCAGAT GGTCAAGTAC
GGCAAGCTGA CGCCGGCGGC CTACGCCACG CTCAGCCGCA AACCGCTGCG CATCGATTTC
GAGCGCCAGA CCGAGCCGCC GGGTCCGGCG CCGCACTTCG CGCAGCAATT GCGCAAGTGG
CTGGCGTCAT GGGCGGATCG CAACGACTAC AACATGTACG CCGACGGGTT GGTGGTGCGC
ACCACCATCG ATTCGCGTCT GCAGACTATG GCCACCCAGG CGGTCACCTT GCAGGGCAAC
CAGTTGCAGG GCATCGCCAA CTCGGTGTGG GGCACGCGCG CGGGCTGCTC GAACGGGCGC
GACCTGCTGC AGACTTTTCT GCGCGAAACG CCGGATTACC GCGCCGCCAA AGACGCGGGC
CTGAGCGACG ACGACGCGCT CAAGCGCGTC TCGTCCGACC GCGAGCTCGT AAAGTCGCTG
TGCGAATCCA AGACGCGCGT GCAGGCGGAC TTTCTGGCAA TGGACCCGCG CAACGGCCAG
ATCCGGGCAT GGGTGGGCAG CCGCGACTTC AGCCAGGATC CGTTCGACCA CGTCCAGCAG
GCGCGGCGCC AGCCGGGTTC GACCTTCAAG CCGTTCGTCT ACGCGGCCGC GTTCGAGGCG
GGCGCCAAGC CTACCGATAC CTTCGTGGAC AAGCCCGTGG AGATCCCGCT GGCAGGCGGC
GAAGTCTGGC GTCCGGGCGA CGAGGACGAG CCGAGCGATC GCAAGATCAG CCTGCGCGAC
GGCCTCGCGT ATTCGCGCAA CCGGATCACC GCGCAGTTGA TGGAAACGGT CGGGCCGAAC
AAGGTCGCGC GCCTCGCCCG CGCGATGGGC GTGCGCGACA GCGAGCTGGA CCCGGTGCCG
TCGCTCGCGC TCGGCACGAG CCCCGTCACG CTGAAGGAGA TGGTCTCGGC CTACGGCACG
ATCGCCAATC TGGGCGGCTA CGTGGAACCG GTGATGGTCA CGCGTATCGA GGACCGCAAG
GGCGACGTGC TGGCCGAGTT CGCGCCGGTG CCGCCCAAAC AGGAACTCTC CGCCGATGCC
GACCGGATGC TCATCGACGT CATGCGCGAC GTGGTGAACC GCGGCACGGG GTCGAGCATT
CGCAGCCGCT TCGGCGTGCG CGGCGACGTC GCCGGCAAGA CGGGGACGAC GCAGGGCAAT
GCGGACGGCT GGTTCATCCT GATCCATCCG CAACTCGTGG CGGGCGCGTG GGTCGGCTTC
AACGACAGCC GCGTGACCTT GCGCAGCGAC TATTGGGGGC AGGGGGCGCA CAGCGCGCTG
CCGATCGTCG GCGATTTCTT CCAGCGCGCG CAGCGCTCGA GGCTGATCGA TACGCGCGTC
AAGTTCGCGA CCGACCAGGA GCCGGGGTGG TTTGCCGAGC GTTCGGCCAG GTTGCGCGCG
TGGTTCGGGA ACCTGTTCGC GTCGTCGCCG CCGGCCAGGC CGGAGGCGCC GGTTGCGCCG
CGCGGTACGA CGCGGCGCGC GCCGGCTAGT GCTCCTGCGG TGCCCGTGGA GCCGTCGGCG
TCCGCTACGT TGGCGGAGCC GCGTGACATC CCGCAACCGC CGTTGCTTCA GGCGCCGGGG
TCCGCGCCGG GTTCAGCGCC GGCAGCAGCG AGCGGGGCGG TCGACGGTGA AGCGCGCGGC
GGCGGCGAGC CGGCGTTGGC GCCGACGCCC ACGCCCGACG ATGTGGTGCC GCCGGACGCC
GGCAGCCCGG CCAACGCGTT GCCGGGAACG TCGACGAACG GCGGCAGCTC GCCTTGA
|
|---|
| Protein sequence | MKRLIPSLLE TLEKGLTLAN PLIAQALWHL RHPTRRGVLK ACAALPLLFV LYVLILIPFT
PGIGDIRKAK VEQPAQILSA DGKLLAEFKP SNREWVKLRD ISPNVVNALI ATEDHRFYQH
WGLDWRRTAS AALHTFSGDR QGGSTITQQL ARNLYPDEIG RAPTLTRKLK EAITAFKIEA
LYTKDEILET YLNTVPFLYN AYGIEMAART YFDKSASDLT VLESATLTGM LKGNSYYNPV
LNPERALQRR NTVLGQMVKY GKLTPAAYAT LSRKPLRIDF ERQTEPPGPA PHFAQQLRKW
LASWADRNDY NMYADGLVVR TTIDSRLQTM ATQAVTLQGN QLQGIANSVW GTRAGCSNGR
DLLQTFLRET PDYRAAKDAG LSDDDALKRV SSDRELVKSL CESKTRVQAD FLAMDPRNGQ
IRAWVGSRDF SQDPFDHVQQ ARRQPGSTFK PFVYAAAFEA GAKPTDTFVD KPVEIPLAGG
EVWRPGDEDE PSDRKISLRD GLAYSRNRIT AQLMETVGPN KVARLARAMG VRDSELDPVP
SLALGTSPVT LKEMVSAYGT IANLGGYVEP VMVTRIEDRK GDVLAEFAPV PPKQELSADA
DRMLIDVMRD VVNRGTGSSI RSRFGVRGDV AGKTGTTQGN ADGWFILIHP QLVAGAWVGF
NDSRVTLRSD YWGQGAHSAL PIVGDFFQRA QRSRLIDTRV KFATDQEPGW FAERSARLRA
WFGNLFASSP PARPEAPVAP RGTTRRAPAS APAVPVEPSA SATLAEPRDI PQPPLLQAPG
SAPGSAPAAA SGAVDGEARG GGEPALAPTP TPDDVVPPDA GSPANALPGT STNGGSSP
|
|---|
| |