| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2021 |
|---|
| Symbol | |
|---|
| ID | 4003342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 2693340 |
|---|
| End bp | 2694740 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637947616 |
|---|
| Product | major facilitator superfamily multidrug efflux transporter |
|---|
| Protein accession | YP_558997 |
|---|
| Protein GI | 91783791 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGG ATTCTTCCCA GACCGCTCTG CTCTGGATCG TCGCTGCCGG TTTTTTCATG
CAGTCCCTCG ACACGACGAT CGTCAATACC GCCTTGCCGT CGATTGCGAA CAGCCTGCAC
GTCGCACCGC TTGCCATGCA GCCCATCGTG GTCGCCTACA CCCTGACTAT GGCGATGCTC
ACGCCCGCCT CCGGCTGGCT CGCCGACCGC TTCGGCACGC GGCGCGTCTA TTTCGCGGCC
ATTCTGCTGT TCGTGATCGG CTCGATCTGC TGCGCGAGCG CGCATACGCT CGGCCAACTG
GTGATGGCGC GCGTGCTGCA AGGCGTGGGC GGCTCGATGC TGCTGCCGAT CGGACGGCTC
GCCGTGTTGC GCAGCGTGAC GGGCGAACAG TACGTCGCGG CCCTCGCATT CATTTCGGTC
GCGGGACAGT TGGGACCGAT CGCCGGGCCG ACGCTCGGCG GCTGGTTCGT TCAGGCGATC
ACGTGGCACT GGATTTTCCT CATCAACGTG CCGATCGGCG CCGTGGGTCT GTACGCGGTG
CAGCGCTTCC TGCCCTCGCA CGGCGAAACC CAGGCGCCGC CGTTCGACTT CGTCGGCTGC
GGGCTGCTTT CGCTGTGCAT GATCGCGTTC TCGCTCGCCA TCGACGCGCC CATGCCCACG
CATCGGCTGG CATGGTCCGC GGCGCTCTTC GTACTCGCCG CGCTGAGCGC GCTCGCCTAC
ATTCCGCATG CGAAACGCCG GGTCAATCCG CTCTTCAAGC TTTCGCTGTT TCGCGAGCCC
AATTTCAGCG TCGGTCTGAT CGGCAACCTG GTGTGCCGCA TCGGTTCGAG CGCCGTGCCG
TTTCTCGTGC CCTTGCTGCT GCAACTGCAA CTGGGCTATT CGCCGCTGCA TTCCGGCCTG
ATGATGCTGC CCGCCGCGCT GGCCGGCACC GTCGCCAAAC GCTGGATCGC GCCGCTCGTG
CGCCGCTATG GCTACGACAC GTTCCTGCTC GTCAACACCG TGATCGTCGG TTCCTCGATC
GTGGCCTTTG CGCTGATTAC GCGCGGCACG CCGCTCGTGG TCGAGATCGC GATCCTCGCC
GTGTTCGGCG CCGCCAATTC CATGCAATTC GCGGCGATGA ACAGCGTCAC GCTCAAGGAC
CTCTCGCATG CCGACGCCGG CAGCGGCAAC AGCCTCTTTT CGATGGTGCA GATGCTGGCG
ATCGGGCTGG GTGTATCGAT CGGCGGCGGG CTGGTGAATC TCTTCTCCGC GCAGGTGGGA
TCGGCGGCAC TCGGGTTTCG CCTCGCGTTC GTGTGCGTGG GCGTGATCAC GCTGGTGTCG
GCCTGGGTGT TTCGTCATCT CGACGAAGCG CCTGCCTCGC GCACGGTGCG CGGGCAAGCG
ACTCAAGGCG CGGGGCGCTG A
|
|---|
| Protein sequence | MTKDSSQTAL LWIVAAGFFM QSLDTTIVNT ALPSIANSLH VAPLAMQPIV VAYTLTMAML
TPASGWLADR FGTRRVYFAA ILLFVIGSIC CASAHTLGQL VMARVLQGVG GSMLLPIGRL
AVLRSVTGEQ YVAALAFISV AGQLGPIAGP TLGGWFVQAI TWHWIFLINV PIGAVGLYAV
QRFLPSHGET QAPPFDFVGC GLLSLCMIAF SLAIDAPMPT HRLAWSAALF VLAALSALAY
IPHAKRRVNP LFKLSLFREP NFSVGLIGNL VCRIGSSAVP FLVPLLLQLQ LGYSPLHSGL
MMLPAALAGT VAKRWIAPLV RRYGYDTFLL VNTVIVGSSI VAFALITRGT PLVVEIAILA
VFGAANSMQF AAMNSVTLKD LSHADAGSGN SLFSMVQMLA IGLGVSIGGG LVNLFSAQVG
SAALGFRLAF VCVGVITLVS AWVFRHLDEA PASRTVRGQA TQGAGR
|
|---|
| |