Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1966 |
Symbol | |
ID | 4002930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 2756496 |
End bp | 2757992 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637947671 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_559052 |
Protein GI | 91783846 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.391464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00633944 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCACGC CCACACTCTT CCGATACTCG CGCATCACCG CGCTCGCCGG CATGGCATGC GCGCTCGCCG CCTGCTCGTT CGGGCCGGGC GGCGAGCCGC CCGCCATGCC GCAACCCGCG CACTACGGCG CCGAAGCGCA GCCGGCGCAA ACCGTGCCCG CGCAAGGCGT CACCCAGCAG TTCGTGGTGG GCGCGAAGCC GGTGCCCGAA TGGTGGAAGC TGTATCAGTC GGACGCGCTG AACGCGCTGG TCGACGAAGG CTTGCGCAGC AGCCCCACCC TCGCCGCGAC CGACAGGAGC CTCGCCGCCG CGCGCGAGCA GTTGCGCGCG CAGATCGGCA GCTCGATGCT GCCCACCATC GACGCCGGCG GCCAGGCGAC CCGCAATCGC GCGCTGGCGA TCCCTGAGAT CGGACCCAAC ACGTTTCTGT ACAACGTCTT TGTCGGTCAA TTGCAGGCGC ACTACACGTT CGACCTGTTC GGTGCGGCGC GCCTCGCCGA TGCCGCGCTC GCCGCGCGCG TCAACGTTCA GGCCTATCAG TTCGACGCCG CGCGCCGCGC TCTGGCCGCC AACATCGTGA CCGCGGCGAT CACCAGCGCG GCGCTGCATG CGCAGATCGA GACGACCGAA CGGCTCGTGA CGATCGCCAA CGATCAGGCA CGCGACACGC AGCGGCGTTA TGCGCTGGGC GCGGTCTCGC ATGCGGATCA GCTGAGCGCG CAACAAAGCG CGGCCAGCTT GTCGGCGAGC TTGCCGGGCC TGAAGCAGCA ATGGCTGAGC ACGCGCCACG CGCTGGCGGT GCTACTCGGC CGGACGCCTG ACGCGGCGCC GGAGGATCTG GCGCTCGCGC AACTGCACGT GCCTGAGCAG GTGCCGGTGG TGGTGCCGTC GGAACTGCTG CGCAGCCGCC CCGACATTCA GGCCGCCGAC GCTGCGTTGA AGGCCGCGGC GGCCGATGTC GGCGTCGCCA CGGCGCAGAT GTATCCGAGT CTGTCGTTGA GTGCATCGAT GGGACAAGGC GGCTTTAGCT GGCCGGTCGC GCTCTCCGGT GCGGGCGCGA TCTGGAGCAT CGGTGCGTCG CTGTCGCAGC CGTTGTTTCA TGGCGGCGCA CTGGTCGCGC AACGGCGTGC GGCGCTCGAT ACCTATGACG CCACGGTCTC GCAGTACAAG CAAACGGTAT TGGCCGCGTT CCAGAACGTC GCGGACACGC TTGCGGCGCT CGAGCACGAC TCGCAGGCGC TGGACGCCGC GAATATTGCG GCGCGCTCGG CGCAAGGCAT CTTCGATGAA ACCTCCGGGC GCTACCGGCT GGGCGCGCTG CCTGTGGCGT CGGCGCGTTC GAGCGAGCAG CAGTTCCGCA ACGCGCAGCT TGATGAGATT CGCTATACGA GCGCGCGGCT GACGGACACG GCGGCGCTGT TCCAGGCGAT GGGGAATCCG CCGGTTGAGA CGGGGGTGGG TGGGGCTTCG GCGGCGAGCG CTGGCGTCGC CGAGTAG
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Protein sequence | MTTPTLFRYS RITALAGMAC ALAACSFGPG GEPPAMPQPA HYGAEAQPAQ TVPAQGVTQQ FVVGAKPVPE WWKLYQSDAL NALVDEGLRS SPTLAATDRS LAAAREQLRA QIGSSMLPTI DAGGQATRNR ALAIPEIGPN TFLYNVFVGQ LQAHYTFDLF GAARLADAAL AARVNVQAYQ FDAARRALAA NIVTAAITSA ALHAQIETTE RLVTIANDQA RDTQRRYALG AVSHADQLSA QQSAASLSAS LPGLKQQWLS TRHALAVLLG RTPDAAPEDL ALAQLHVPEQ VPVVVPSELL RSRPDIQAAD AALKAAAADV GVATAQMYPS LSLSASMGQG GFSWPVALSG AGAIWSIGAS LSQPLFHGGA LVAQRRAALD TYDATVSQYK QTVLAAFQNV ADTLAALEHD SQALDAANIA ARSAQGIFDE TSGRYRLGAL PVASARSSEQ QFRNAQLDEI RYTSARLTDT AALFQAMGNP PVETGVGGAS AASAGVAE
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