Gene Bxe_A1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A1962 
Symbol 
ID4002934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp2762594 
End bp2763472 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content63% 
IMG OID637947674 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_559055 
Protein GI91783849 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.310079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00642577 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAAAAGTC GAATCCTGAT CTGTCTGATG ACAGGTCTGC TGCGCGCGTT TGCCTTTCTG 
CCATACAGCG TTGTCGCGCG GATCGGCACC GGTATCGGTG CCTTGCTGTA CCGGATTCCG
AGCACGCGCC GGCGCGTCGT GCATACCAAC CTGAAGCTGT GTTTTCCGGA CATGAGCGAC
GAGGCGCGCG AACGTCTGGC GCGCGCGCAC TTCTGTCACG TGATCCGCAG TTATGTCGAG
CGCGGCCCGC AGTGGTTCGG CAATGCGCAG GCGCTGGCTC GCCTCGTCGA GGTGGAGAGC
GCGATCGATC TCTCGGATAT GGCGGGAAAG CCGACCATTT TCGTCGGCTT CCATTTCGTT
GGCATCGAAG CGGGCTGCAT GATGTATTCG ACGCGGCATC CGGTCGCCTC GCTCTATACG
CCCATGTCGA ACCTGCTGCT CGACGCGATG GCCAAGCGTC AGCGCGGACG CTTCGGCACG
GAGATGATTC CGCGCAGCGA TAGCGTGCGG CGGGCGTTGC GCACGCTACG CGAAGGCAAG
CCGGTCATGC TGGCCGCCGA CATGGATTTC GGCTTGCGGG ATTCGGTGTT CGTGCCGTTC
TTCGGCGTGC CGGCCTGCAC GCTGACCTCC GTCTCGCGGA TGGCGCGTGC GGCGAATGCG
CGGGTGGTGC CGTTCGTGAC GGAAGTGCTG CCGGATTATC GCGGCTACAA GCTGAATATC
TTTGAGGCGC TGGGCGATTT TCCGTCCGAC GACGTGGCGG TCGACGCGCG GCGTATCACG
GCGTTTCTGG AGACGCAGGT TAGACGGATT CCTGATCAGT ATTATTGGGT GCACAGGCGC
TTCAAGAATC GGCCGGCGGG CGAGGCGAGT GTTTATTGA
 
Protein sequence
MKSRILICLM TGLLRAFAFL PYSVVARIGT GIGALLYRIP STRRRVVHTN LKLCFPDMSD 
EARERLARAH FCHVIRSYVE RGPQWFGNAQ ALARLVEVES AIDLSDMAGK PTIFVGFHFV
GIEAGCMMYS TRHPVASLYT PMSNLLLDAM AKRQRGRFGT EMIPRSDSVR RALRTLREGK
PVMLAADMDF GLRDSVFVPF FGVPACTLTS VSRMARAANA RVVPFVTEVL PDYRGYKLNI
FEALGDFPSD DVAVDARRIT AFLETQVRRI PDQYYWVHRR FKNRPAGEAS VY