| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1952 |
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| Symbol | |
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| ID | 4002813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 2775960 |
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| End bp | 2776889 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637947684 |
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| Product | ABC polyamine transporter, inner membrane subunit |
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| Protein accession | YP_559065 |
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| Protein GI | 91783859 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00258406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.610972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCT CGTTCAATTC CTTCGCCAAC TGGCCGGTGC GGCGCTTCAA CCTGACCGGC
CGCACGGCGG TGGTGGCCGG TCCGTTCATC TGGCTGCTGC TGTTTTTTCT CGTGCCGTTC
CTGCTGGTCG TCAAGATCAG CTTCGCCGAC TTGCAGCTCG GCATTCCGCC GTACACGGAG
TTGACCAACT TCGCGGACGG CGCGATTCAC ATCACGCTCG ACCTGTCGCA TTACGCGTTT
CTGCTGACCG ACAGCCTCTA TTTCGCGACC TACGTGAATT CCGTGGTGGT GGCCGCGATC
TCGACGCTGT TGTGTTTGCT GATCGGCTAC CCGATGGCGT ATTACATCGC CCGTTCGAAT
CCGGCCAGCC GCAATCTGCT GATGATGGCC GTGATGCTGC CGTTCTGGAC GTCGTTTCTG
ATTCGCGTGT ATGCGTGGAT CGGCATCCTG AAGAACAATG GCTTGCTGAA TAACTTCCTG
ATGTCGATCG GGCTGATTCA CTCGCCGATC GAGCTGTATC ACACGAATAC CGCCGTTTAT
ATCGGCATGG TCTATTCGTA TCTGCCTTTT CTCGTCATGC CGCTGTACGC GCATCTGGTG
AAAATGGACA TGACGCTGCT GGAGGCCGCC TACGACCTCG GAGCGCGGCC CTGGAAGGCA
TTCTGGCAGA TCACGTTGCC GCTCTCGAAG AACGGCATCA TCGCCGGCTG TTTGCTGGTG
TTCATTCCGG CAGTGGGCGA GTACGTGATT CCCGAATTGC TGGGCGGCGC GAACACGCTG
ATGATCGGCC GCGTGATGTG GAACGAGTTC TTCGACAATG CCGATTGGCC GATGGCATCC
GCCGTGACGT GCGCGATGGT GTTGCTGCTA TTGGTGCCGA TGGCGCTTTT CCAGTACTCG
CAGGCAAAGG CGATGGAGGA AAAGCGCTGA
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| Protein sequence | MKRSFNSFAN WPVRRFNLTG RTAVVAGPFI WLLLFFLVPF LLVVKISFAD LQLGIPPYTE
LTNFADGAIH ITLDLSHYAF LLTDSLYFAT YVNSVVVAAI STLLCLLIGY PMAYYIARSN
PASRNLLMMA VMLPFWTSFL IRVYAWIGIL KNNGLLNNFL MSIGLIHSPI ELYHTNTAVY
IGMVYSYLPF LVMPLYAHLV KMDMTLLEAA YDLGARPWKA FWQITLPLSK NGIIAGCLLV
FIPAVGEYVI PELLGGANTL MIGRVMWNEF FDNADWPMAS AVTCAMVLLL LVPMALFQYS
QAKAMEEKR
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