| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1946 |
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| Symbol | |
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| ID | 4002819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 2783097 |
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| End bp | 2783753 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637947690 |
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| Product | OmpW family outer membrane porin |
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| Protein accession | YP_559071 |
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| Protein GI | 91783865 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3047] Outer membrane protein W |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000112582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.916389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACT CGTTGAGGAA CCGATTCAAA GCCGCCGCCA TCGTTTCGAG CCTGCTGTGC
GCGGGCGCTT TTGCCTCGCA GGCGCATGCC GAGGGCGATG ATACGATGAA CGGCATTCAT
GCCGGCGACG TGCTGGTGCG GCTGCGCGCC ATCAGCATCA TGCCGAACGT GAGCACCACC
CAATCGCTGT CGGCGCTCAA CGTGGACGTG AACAACGCGA TCATGCCGGA ACTGGATCTG
ACCTATATGA TCCGCGATTA CCTCGGCGTC GAACTGATTC TCGCCACCTC GCGGCATCAG
CTGACCTCGA GCCTCGGCAA TCTCGGTGGC GTGAACGTGC TGCCGCCTAC GCTGTTGCTG
CAATATCACT TCAACCATGC GGGACGCATT CGTCCGTATC TGGGCGCCGG TCTCAACTAC
ACGCTGTTTT ACAACAACGG CCTGAACGCG GGCGGCCAGT CGATCGGGAT TACCAACCAT
AGCTGGGGCC CGGCGCTGCA GGCCGGTGTC GACGTTCAGG TGACCAAGAC GTTGTTCGTC
AACGCGGACA TCAAGAAAAT CTGGATGCAT ACGGATGCCA CGCTCGGCGG CCAGCCGCTG
GGTCGCCTGA GCATCGATCC GGTGGTGGTC GGCCTGGGTG TCGGGATGCG CTTCTGA
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| Protein sequence | MKHSLRNRFK AAAIVSSLLC AGAFASQAHA EGDDTMNGIH AGDVLVRLRA ISIMPNVSTT
QSLSALNVDV NNAIMPELDL TYMIRDYLGV ELILATSRHQ LTSSLGNLGG VNVLPPTLLL
QYHFNHAGRI RPYLGAGLNY TLFYNNGLNA GGQSIGITNH SWGPALQAGV DVQVTKTLFV
NADIKKIWMH TDATLGGQPL GRLSIDPVVV GLGVGMRF
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