| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1908 |
|---|
| Symbol | |
|---|
| ID | 4004853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 2818740 |
|---|
| End bp | 2820347 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637947728 |
|---|
| Product | cytochrome bd ubiquinol oxidase, subunit I |
|---|
| Protein accession | YP_559109 |
|---|
| Protein GI | 91783903 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.522276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0809617 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTTA GCGAAGTCGT AGAACTGTCG CGCCTCCAGT TCGCCATCAC GGCGCTTTAT
CACTTCCTGT TCGTCCCGCT CACGCTCGGC CTGTCCTGGC TGCTCGTCAT CATGGAATCC
GTCTACGTGA TGACCGGCAA GCAGATCTAC AAGGACATGA CCCAGTTCTG GGGCAAGCTC
TTCGGCATCA ACTTTGCAAT GGGCGTGACC ACCGGTCTCA CGCTCGAATT CCAGTTCGGC
ACCAACTGGT CGTACTACTC GCATTACGTG GGCGACATTT TCGGCGTGCC GCTCGCCGTC
GAAGGCCTGA TGGCGTTCTT CCTCGAATCC ACCTTCGTCG GCCTGTTCTT CTTCGGCTGG
AAGCGGCTCT CCAGGGTGCA GCACGTGATC GTGACGTTCC TCGTCGCGCT CGGCTCGAAC
CTCTCGGCGC TGTGGATTCT GGTGGCCAAC GGCTGGATGA ACAATCCGGT CGGCGCCACC
TTCAACTACC AGACCATGCG CATGGAACTC GACAGCATCT TCTCCGTGCT GTTCAATCCG
GTCGCGCAGG TCAAGTTCGT GCACACCGTC TCCGCCGGCT ACGTGACGGC CTCGATGTTC
GTGCTCGGCG TGTCGTCGTG GTATCTGCTC AAGCGCCGCG ACACCGAATT CGCACTGCGC
TCGTTCGCGA TCGCCGCCGG TTTCGGCCTT GCGTCCACGC TGTGCGTGAT CGTGCTCGGC
GACGAATCCG GCTACCGCAC CGGCGAAGTC CAGCAGGTCA AGCTCGCCGC GATCGAATCC
GAATGGGAAA CCGCGCCCGC GCCGGCCCCG TTCACGATCA TCGGGATTCC GAACCAGAAA
GAAGAGCGCA CCGACTACGC GATCCGGGTT CCCTACGCGC TCGGCCTGAT CGCCACCCGT
TCGCTCGACG AACCCGTGGT CGGCCTGAAA GACCTGATGG TGCGCAACGA AGCGCGCATC
AGGAACGGCA TGCTGGCCTA CGCCGCGCTG CAGAAGCTCA AACAGGGCGA CGTCACCGAC
GAAGCCAAAG CCGCCTTCGA CGCGCACAAG CAGGATCTCG GCTACGGCCT GATGCTCAAG
CAGTTCACCG CGAACGTCAC CGACGCCACG CCGGACCAGA TCACCCAGGC CGCGAAGAAA
ACGATCCCGC CGGTAGCGCC CGTGTTCTTC TCGTTCCGGC TGATGGTGGG CCTCGGCATC
CTGTTCCTCG CCACCTTCGT GCTCGCCTTC TGGTTCTGCG CGCAACGTTC GCTGCTGCTG
GAAAAGCGCC GCTGGTTCCT GCGCTGGGCG CTGTGGGCGA TTCCGCTGCC CTGGCTCGCG
GCCGAATTCG GCTGGATCGT CGCCGAGGTG GGTCGTCAGC CGTGGACCAT CGCGGGCATT
CTGCCGACTA ACCTGTCGGC CTCGAGTCTG ACCGCGGGCG ACCTGTATCT GAGTATCGGC
GGCTTCGTGG TGTTCTACAC GGTGCTGTTC ATCATCGAAA TCATGCTGAT GTTCAAGTAC
GCGCGGCTCG GTCCTTCTTC GCTGCACACG GGCCGCTATC ACCACGAACA ACCGTCACCG
GATCAGCCGC TGGACAACCG GCCGCTGCCG ACCAGCACGG TCGCCTGA
|
|---|
| Protein sequence | MPVSEVVELS RLQFAITALY HFLFVPLTLG LSWLLVIMES VYVMTGKQIY KDMTQFWGKL
FGINFAMGVT TGLTLEFQFG TNWSYYSHYV GDIFGVPLAV EGLMAFFLES TFVGLFFFGW
KRLSRVQHVI VTFLVALGSN LSALWILVAN GWMNNPVGAT FNYQTMRMEL DSIFSVLFNP
VAQVKFVHTV SAGYVTASMF VLGVSSWYLL KRRDTEFALR SFAIAAGFGL ASTLCVIVLG
DESGYRTGEV QQVKLAAIES EWETAPAPAP FTIIGIPNQK EERTDYAIRV PYALGLIATR
SLDEPVVGLK DLMVRNEARI RNGMLAYAAL QKLKQGDVTD EAKAAFDAHK QDLGYGLMLK
QFTANVTDAT PDQITQAAKK TIPPVAPVFF SFRLMVGLGI LFLATFVLAF WFCAQRSLLL
EKRRWFLRWA LWAIPLPWLA AEFGWIVAEV GRQPWTIAGI LPTNLSASSL TAGDLYLSIG
GFVVFYTVLF IIEIMLMFKY ARLGPSSLHT GRYHHEQPSP DQPLDNRPLP TSTVA
|
|---|
| |