Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1744 |
Symbol | |
ID | 4005188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 2981111 |
End bp | 2981938 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637947884 |
Product | short chain dehydrogenase |
Protein accession | YP_559265 |
Protein GI | 91784059 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.324234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAAAA ACTGGCTGAT CACAGGTGCT TCGAGCGGGC TCGGGCGCGG ACTGACCGAG CGCTTGCTGG CGCGCGGCGA CGCTGTGGTG GCGACGCTGC GCAAACCCGG TTCGCTTGAC GATCTGAAGA CGCAACACGG CGATCGCCTG AAAATCGTCG CGTGCGACGT GACCGATGCC GATGCGATCC GGGCTGCGGT CGCAGATGCC TTCGCGGCTC GCGAACGGAT CGACGTCGTC GTCAGCAATG CGGGTTACGG CTTGTTCGGC GCGGCGGAGG AATTGAGCGA CGCGCAGATC GAACGGCAAA TCGCCACCAA CCTGACCGGC TCGATCCAGC TGATTCGCGC CGCCGTCGCG CGTCTGCGGT TGCAGGGCGG CGGACGCATA GTACAAGTGT CGTCGGAAGG GGGGCAGATT TCCTATCCAG GCTTCAGTGT GTATCACGCG ACGAAGTGGG GCATCGAGGG TTTCGTCGAA GCCGTCACGC AAGAGGTGGC AGCGTTCGGC ATCGACTTCG TGATCGTGGA GCCCGGGCCC ACGCGCACCA ACTTCGGTGC GGGACTGGAT CGAGCGGCGC CGCTCGACGC GTACGACGGC ACGCCAGTGC GCGAACTGCG GCGCACGATC GACGCGGGTT ATTTCGAATT GGCCGATGCG AGCAAAACGG TCGATGCGAT GCTTGCAGCG ATCGACAGTC CGTCTCCGCC GTTCCGGGTG GCGCTCGGCA GGTCCGCCTA CGAGTCGGTC CGCACCGCGT TGGCCAAACG CCTCGCCGTG CTGGAGCCGC AGAAGACCGT CGCGCTTTCC GTGATGGAGC GCGCATAA
|
Protein sequence | MTKNWLITGA SSGLGRGLTE RLLARGDAVV ATLRKPGSLD DLKTQHGDRL KIVACDVTDA DAIRAAVADA FAARERIDVV VSNAGYGLFG AAEELSDAQI ERQIATNLTG SIQLIRAAVA RLRLQGGGRI VQVSSEGGQI SYPGFSVYHA TKWGIEGFVE AVTQEVAAFG IDFVIVEPGP TRTNFGAGLD RAAPLDAYDG TPVRELRRTI DAGYFELADA SKTVDAMLAA IDSPSPPFRV ALGRSAYESV RTALAKRLAV LEPQKTVALS VMERA
|
| |