| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1701 |
|---|
| Symbol | |
|---|
| ID | 4004998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3025550 |
|---|
| End bp | 3026482 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637947925 |
|---|
| Product | SPFH domain-containing protein/band 7 family protein |
|---|
| Protein accession | YP_559306 |
|---|
| Protein GI | 91784100 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.564295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCGA CCATCGTCGG GGCGGTGCTT CTGATCATCG TGATCGTACT GGCGGCGCAG
ATCATCAAGA TCGTGCCGCA ACAGCATGCG TGGGTTCTGG AGCGGCTCGG CCGCTATCAC
CGTACGCTGA CGCCGGGGCT GAGCTTCGCG TTTCCGTTTG TCGACCGGAT CGCTTATAAG
CACATTCTCA AGGAAATTCC GCTCGAAGTG CCGAGCCAGG TCTGTATCAC GCGCGACAAC
ACGCAGTTGC AGGTGGACGG CGTGCTGTAC TTTCAGGTTA CCGATCCCAT GAAGGCGTCG
TACGGGTCGA GCAACTTCGT GTTCGCGATC ACGCAGCTGT CGCAAACCAC GCTGCGCTCG
GTGATCGGCA AGCTCGAACT CGACAAGACC TTCGAGGAGC GCGACTTCAT CAATCACAGC
ATCGTGTCGT CGCTCGATGA AGCGGCGTCG AACTGGGGCG TGAAGGTGCT GCGCTACGAG
ATCAAGGACC TGACGCCGCC CAAGGAGATT CTCCACGCCA TGCAGGCGCA GATCACCGCA
GAGCGGGAAA AGCGCGCGCT GATCGCGGCG TCGGAAGGGC GCAAGCAGGA ACAGATCAAT
ATCGCGTCCG GTGGGCGTGA GGCGGCGATC CAGAAGTCGG AGGGTGAGCG GCAGGCGGCG
ATCAATCAGG CGCAGGGGCA GGCGTCGGCG ATTCTGGCCG TGGCCGAGGC CAATTCGCAG
GCGATTCAGA AAATCGCGGC CGCGATCCAG TCGAACGGCG GGATGGAAGC GGTCAATCTC
AAGGTGGCCG AACAATATGT GAACGCGTTC GGCAATCTGG CGAAGCAGGG CACCACGCTG
ATCGTGCCCG GCAATCTTGC GGACATGAGT TCGATGATCG CCTCGGCGCT GACGATCGTG
AGCAAAGGGA AGGGCACGAC CGAGATGCGC TGA
|
|---|
| Protein sequence | MDSTIVGAVL LIIVIVLAAQ IIKIVPQQHA WVLERLGRYH RTLTPGLSFA FPFVDRIAYK
HILKEIPLEV PSQVCITRDN TQLQVDGVLY FQVTDPMKAS YGSSNFVFAI TQLSQTTLRS
VIGKLELDKT FEERDFINHS IVSSLDEAAS NWGVKVLRYE IKDLTPPKEI LHAMQAQITA
EREKRALIAA SEGRKQEQIN IASGGREAAI QKSEGERQAA INQAQGQASA ILAVAEANSQ
AIQKIAAAIQ SNGGMEAVNL KVAEQYVNAF GNLAKQGTTL IVPGNLADMS SMIASALTIV
SKGKGTTEMR
|
|---|
| |