| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1692 |
|---|
| Symbol | lpxD |
|---|
| ID | 4005007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3035400 |
|---|
| End bp | 3036512 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637947934 |
|---|
| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|---|
| Protein accession | YP_559315 |
|---|
| Protein GI | 91784109 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|---|
| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.336834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.209111 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTA CGCTCGAGGA CATCGTCCAA CGGTTCGGCG GTGAAGTAGT CGGAAACGGT
TCGCAGCGCG TCGGCAGTCT TGCGCCGCTC GACCAGGCAG GCCCGGACCA GCTGGCGTTC
CTCGCCAATC CGAAGTACCT GTCGCAGGTC GAAACGACCC GTGCGGGCGC CGTGTTGATC
AACGCCGAAG ACCTCGCCAG GCTCGCTTCC CGCGAGAGTC GTAACTTCAT CGTCACGCCG
AATCCGTACG CTTACTTCGC GCGCGTCGCG CAAACCTTTA TCGACCTCGC TGCGCCCAAG
GCGGTGCCCG GCGTGCACCC GAGCGCAACC ATCGACCCGT CGGCGCAGAT TGCCGCGAGC
GCGGTGATCG GCCCGCATGT CACGGTGGAG GCGGGCGCGG TGATCGGCGA AAACGTGCGG
CTCGACGCCA ATGTCGTGAT CGGCCGTGGA ACGCGCATCG GCGCGGACTC GCACCTTTAT
CCCAATGTCG CGGTGTACTA CGGTTGCAAG CTGGGCGAGC GCGTGATCGT GCACGCGGGC
GCGGTGATCG GCTCGGACGG TTTCGGCTTC GCGCCGGATT TCGTCGGCGA GGGTGACGCG
CGTACCGGCA GCTGGGTGAA GATTCCGCAG GTGGGCGGCG TGTCGATCGC GGCAGACGTG
GAAATCGGCG CGAACACCAC CATCGACCGT GGCGCAATGG CCGATACCAT CATCGAAGAG
TGCGTGAAGA TCGACAATCT CGTACAGATC GGCCACAACT GCAAGGTCGG AGCCTATACG
GTGATTGCCG GCTGCGCGGG CATCGCGGGC AGCACCACGA TCGGCCGGCA TTGCATGATC
GGCGGCGCCG TCGGGATTGC CGGCCACGTC ACGCTGGCCG ATTACGTGAT CGTCACGGCA
AAGTCGGGCG TGTCGAAGTC GCTGTTGAAG CCTGGTATGT ACACGAGTGC CTTCCCGGCC
GTGAACCATG CAGACTGGAA CAAAAGTGCA GCGTTGCTGC GCAATATCGA CAAACTGCGC
GATCGTATCA AGGCGCTCGA AAACGCCGCG GCCGGACGGC AAGACGGCCC GGCGGCCAAT
GCAGCAAGCA GTTCTGCAGG CGACAAGGCC TGA
|
|---|
| Protein sequence | MAFTLEDIVQ RFGGEVVGNG SQRVGSLAPL DQAGPDQLAF LANPKYLSQV ETTRAGAVLI
NAEDLARLAS RESRNFIVTP NPYAYFARVA QTFIDLAAPK AVPGVHPSAT IDPSAQIAAS
AVIGPHVTVE AGAVIGENVR LDANVVIGRG TRIGADSHLY PNVAVYYGCK LGERVIVHAG
AVIGSDGFGF APDFVGEGDA RTGSWVKIPQ VGGVSIAADV EIGANTTIDR GAMADTIIEE
CVKIDNLVQI GHNCKVGAYT VIAGCAGIAG STTIGRHCMI GGAVGIAGHV TLADYVIVTA
KSGVSKSLLK PGMYTSAFPA VNHADWNKSA ALLRNIDKLR DRIKALENAA AGRQDGPAAN
AASSSAGDKA
|
|---|
| |