| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1676 |
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| Symbol | |
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| ID | 4003353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 3054296 |
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| End bp | 3056362 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637947950 |
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| Product | NAD-dependent DNA ligase |
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| Protein accession | YP_559331 |
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| Protein GI | 91784125 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.194979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0666248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGAA CCCCCGTCTC ACCTCCCGCA ACCAGCGCCC CGGCAGAGCG TGCCGCGTGG
CTGCGCGCGG AACTCGAACG CGCCAATTAC GCGTACTACG TGCTCGACCA GCCGGACCTG
CCCGACGCGG AATACGACCG GCTGTTCAAG GAACTCGAGA GCATCGAGAC GGAACATCCC
GACCTGATCG TGCCGGATTC GCCCACCCAG CGCGTGGGCG GCGAGGCGGC GAGCGGTTTC
GAGCCGGTTG TGCACGAGCA GCCCATGCTG TCGCTGAACA ACGGTTTCGC GGACGAGGAC
ATCGTCGCGT TCGACAAGCG CGTTGGCGAC GCGCTCGGCA AGAATGCGAG CGAGCCGCCG
GTGCCGGTCG AATACGCGGC CGAGCTGAAG TTCGACGGCC TCGCCATTTC GCTGCGTTAT
GTCGACGGCG TATTCGTCCA GGCGTCCACG CGCGGCGACG GCACGACCGG CGAGAACGTC
ACCGAAAACG TCCGCACCAT CCGCTCCATT CCGCTCAGGC TCAAGGGCAA ACGCGTGCCG
CACGTGCTCG ACGTGCGTGG CGAAGTGCTG ATGTTCAAGC GCGATTTCGA ACGTCTGAAC
GAACGCCAGC GGGCCGCGGA ACAAAAGGAG TTCGCCAATC CGCGCAATGC GGCGGCGGGC
AGCTTGCGGC AGCTCGATTC GAAGATCACC GCGCAGCGGC CGCTGTCGTT TTTCTCTTAT
GGAATCGGCG TGCTCGAAGG CATGGACATG CCGGCCACGC ACAGTGAACT GCTCGACTGG
TACAAGGAGC TCGGCTTGCC GGTGAACGGC GAACGGGCGG TGGTGCACGG CGCGGAGGGT
TTGCTGGGCT TTTTCCACGC CGTTGGTGAA AAGCGCGAGA AGCTGCCGTA CGACATCGAC
GGGGTGGTCT ACAAGGTCAA CCGGCGCGAT GAGCAGGAGG CGCTCGGCTT CGTGTCGCGC
GCGCCGCGTT TTGCGCTGGC GCACAAATTC CCCGCGCAGG AAGCGCTCAC CCGGCTGGTC
GCGATCGACG TGCAGGTCGG CCGCACCGGT GCGGTCACGC CGGTGGCGCG GCTGGAACCG
GTGTTCGTGG GCGGCGCGAC GGTCACGAAT GCCACGCTGC ACAACGAAGA CGAGGTGCGC
CGCAAGGATA TCCGCATCGG CGACACGGTG ATCGTGCGGC GTGCCGGCGA CGTGATTCCC
GAAGTGGTGA GCGCGCTGCT CGACCGGCGC CCCGACGACG CCCGCGAATT CGTGATGCCC
ACGCATTGCC CGGTATGCGG CTCGAACATC GAGCGGCTGC CGGACGAGGC GATTGCGCGC
TGTACCGGCG GCCTGTTCTG TCCCGCGCAG CGCAAGCAGG CGTTGTGGCA TTTCGCGCAG
CGGCGCGCGC TGGATATCGA CGGCCTTGGC GAAAAGATCA TCGATCAACT GGTCGAGCAG
AATCTGGTGC GCACACCGGC CGATCTGTTC AACCTCGGCT TCGCGACGCT CGCCGAACTC
GACCGCTTTG CCGAGAAGTC CGCGCAGAAC CTGCTCGATT CGCTCGAAAA GGCCAAGCAC
ACCACGTTGG CGCGTTTTAT CTACGCGCTC GGGATTCGCC ATGTGGGCGA GTCGACGGCG
AAAGACCTGG CCAAACATTT CGGCTCGCTG GATCCGATCA TGGACGCGTC GGTCGAAGCC
TTGCTGGAAG TCAACGACGT CGGGCCGGTA GTGGCCGAGT CGATTCATCA GTTCTTCGCC
GAAGAGCACA ACCGCACGGT GATCGAACAA CTGCGCGCGC CGGGCCGGGT CACGTGGCCG
GAGGGGCCGC CCGCGCCCAA AGCGCCGCAA GGCGTCTTGG CCGGCAAGAC GGTGGTGTTG
ACCGGCACCT TGCCGAGCCT CGCCCGCGAA GAAGCGAAGG AAATGCTGGA AGCAGCGGGC
GCGAAAGTGG CTGGATCCGT GTCGAAGAAA ACGGATTATG TGGTGGCGGG GGCCGAAGCG
GGCAGCAAGT TGGCCAAGGC CGAGGAACTC GGCATTCCCG TACTCGACGA AGATGGTATG
CGTAAGCTCC TGGAGGGGCA GTTATGA
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| Protein sequence | MARTPVSPPA TSAPAERAAW LRAELERANY AYYVLDQPDL PDAEYDRLFK ELESIETEHP
DLIVPDSPTQ RVGGEAASGF EPVVHEQPML SLNNGFADED IVAFDKRVGD ALGKNASEPP
VPVEYAAELK FDGLAISLRY VDGVFVQAST RGDGTTGENV TENVRTIRSI PLRLKGKRVP
HVLDVRGEVL MFKRDFERLN ERQRAAEQKE FANPRNAAAG SLRQLDSKIT AQRPLSFFSY
GIGVLEGMDM PATHSELLDW YKELGLPVNG ERAVVHGAEG LLGFFHAVGE KREKLPYDID
GVVYKVNRRD EQEALGFVSR APRFALAHKF PAQEALTRLV AIDVQVGRTG AVTPVARLEP
VFVGGATVTN ATLHNEDEVR RKDIRIGDTV IVRRAGDVIP EVVSALLDRR PDDAREFVMP
THCPVCGSNI ERLPDEAIAR CTGGLFCPAQ RKQALWHFAQ RRALDIDGLG EKIIDQLVEQ
NLVRTPADLF NLGFATLAEL DRFAEKSAQN LLDSLEKAKH TTLARFIYAL GIRHVGESTA
KDLAKHFGSL DPIMDASVEA LLEVNDVGPV VAESIHQFFA EEHNRTVIEQ LRAPGRVTWP
EGPPAPKAPQ GVLAGKTVVL TGTLPSLARE EAKEMLEAAG AKVAGSVSKK TDYVVAGAEA
GSKLAKAEEL GIPVLDEDGM RKLLEGQL
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