Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1530 |
Symbol | |
ID | 4003470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 3226388 |
End bp | 3227086 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637948101 |
Product | aspartate racemase |
Protein accession | YP_559476 |
Protein GI | 91784270 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1794] Aspartate racemase |
TIGRFAM ID | [TIGR00035] aspartate racemase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.204202 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACAA TCGGCGTGAT CGGCGGGATG AGCTGGGAAT CGTCCACCGA GTATTACAGG CTTCTGAACC GCCACGCGAA GGCGCGTCTC GGCGGCCATC ACAATGCCCG CAGCCTGATG CTCACCGTCG ACTTCGCGCC GGTCGAAGCG CTGCAGCGCG CGGGCGACTG GGACGCGCTC GGCCGGCAGA TGGCCGACGC CGCGCGCCAG CTCGAACGGG GCGGCGCCGA TCTGGTGATG CTCGCGACCA ACACGATGCA TCGCGTGTAT GAATCGATCG AAGCGGCAAT CGACGTGCCG TTCCTGCATA TCGCCGACCC GACCGGCAAC GCGCTGCGCG CGGCAGGCGT CGAGCGGGTG GGCCTGCTCG GCACGCGCTA TACGATGGAG CAGACTTTTT ACACGGGACG TCTGCGCGAG CGCTACGGCC TCACAACGCT GGTTCCCGAC GAAGCCGAAC GCGCGGACGT GCATCGCATC ATCTACGACG AGTTGTGCCA CGGCAAGGTG AACGGCGCTT CGCGCGCGGT CTATCAGCGC GTGATCGAAG CGCTGGCCGC GCGTGGCGCG CAGGCGGTGA TTCTCGGCTG CACGGAAATC ACGTTGCTGA TCAAACCGGA GGATTCGGCG CTACCCGTGT TCGACACGAC CGCGCTGCAT GCGCAGGCGG CAGTGGAGTG GGCGATTGGA GTGGAGTGA
|
Protein sequence | MKTIGVIGGM SWESSTEYYR LLNRHAKARL GGHHNARSLM LTVDFAPVEA LQRAGDWDAL GRQMADAARQ LERGGADLVM LATNTMHRVY ESIEAAIDVP FLHIADPTGN ALRAAGVERV GLLGTRYTME QTFYTGRLRE RYGLTTLVPD EAERADVHRI IYDELCHGKV NGASRAVYQR VIEALAARGA QAVILGCTEI TLLIKPEDSA LPVFDTTALH AQAAVEWAIG VE
|
| |