| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1523 |
|---|
| Symbol | |
|---|
| ID | 4005498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3233394 |
|---|
| End bp | 3234536 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637948109 |
|---|
| Product | putative nitrogen regulation, histidine kinase, protein NR(II) |
|---|
| Protein accession | YP_559483 |
|---|
| Protein GI | 91784277 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.000460807 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0669938 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCTTA AGAATCTGAT CAAGGCAAGG AAAACGCACG AGCCGACACT CTCGGACGAC
GCCCAACTCG TCAGCTCCGG TTTGCTGCCG GGCTTCGAGG CGTTGCCGAC AGTCGTGCTG
GTGCTCGAAA AGCGCACGCT GCGCGTCGCG TTTGCGAACC CGTCGGCGGA GTCGATGCTG
GAGCTCTCGC GCCGGCAACT GACGCAAATG GCGTGGCCGC ACATCTTCTC GAATGCCGAC
GAACTGGTCG CGACCATTTC CGCGATCGCC GCTCACCGCT TTCATGCCAC GCATCTGGAC
GCCGTGCTCG AACGTCCGGG CCACGAACCG CTGCATGTGC ACGCGATCGT GGGTTTTCTG
GAAAGCGCGC AAGACTATGT GCTGCTCGAA CTGTTCGAGA ACGAACGGCA TTTACGCACC
GACCGCGAGG AGCGCATCAA CGACCTCACG GCGGTCAACA AGCAACTGAT CCGCAATCTC
GCGCACGAGA TCAAGAACCC GCTCGGCGGG ATTCGCGGCG CGGCGCAACT GCTCGAGTTC
GAACTCGGCG AGCGTCAGCG TGACGAACTG CGCGAGTACA CGCAGGTGAT CATCAAGGAA
TCGGACCGGC TGCAAACGCT GGTTGACCGT TTGCTCGAAC CGCACCGTCA TCCGCATATC
GTCGGCGACG TGAATATTCA CGAAGTGTGC GAACGCGTGC GCCAGGTGAT TCTCGCGGAG
TTTCCGCGCG GCCTCACCAT CGAGCGCGAT TACGACGTGA GCGTGCCGGA CCTGCGCGGC
GACAAGGAGC AACTGATCCA GGCGCTCCTG AACATCGTGC GCAACGCGGC CGAAGCGTTG
CGCGAACGTA TTTCGCAAGG CGATGCGCGG ATCGAATTGC GCACCCGCGT TGCCCGCAAG
ATTACGGTGT CGAAACGCTT ATGTAAGCTG GCATTGGACT TGCATATCAC AGACAACGGC
CCGGGCATTC CCGAAGAAAT CCGTGACCGC ATTTTCTATC CGCTCGTGTC GGGGCGCGAG
GACGGTAGCG GTCTCGGACT GACGCTTGCG CAGACTTTCG TGCAACAACA CGACGGTCTG
ATCGAAGTGG ATAGCCGCCC GGGTCACACC GAGTTTCAGA TTCTGCTGCC GCTCGACTGC
TAA
|
|---|
| Protein sequence | MVLKNLIKAR KTHEPTLSDD AQLVSSGLLP GFEALPTVVL VLEKRTLRVA FANPSAESML
ELSRRQLTQM AWPHIFSNAD ELVATISAIA AHRFHATHLD AVLERPGHEP LHVHAIVGFL
ESAQDYVLLE LFENERHLRT DREERINDLT AVNKQLIRNL AHEIKNPLGG IRGAAQLLEF
ELGERQRDEL REYTQVIIKE SDRLQTLVDR LLEPHRHPHI VGDVNIHEVC ERVRQVILAE
FPRGLTIERD YDVSVPDLRG DKEQLIQALL NIVRNAAEAL RERISQGDAR IELRTRVARK
ITVSKRLCKL ALDLHITDNG PGIPEEIRDR IFYPLVSGRE DGSGLGLTLA QTFVQQHDGL
IEVDSRPGHT EFQILLPLDC
|
|---|
| |