| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1395 |
|---|
| Symbol | |
|---|
| ID | 4005297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3374952 |
|---|
| End bp | 3376622 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637948238 |
|---|
| Product | putative acetyl-CoA synthetase |
|---|
| Protein accession | YP_559611 |
|---|
| Protein GI | 91784405 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.527272 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCG ACGGCCAGAC CTACGAATCG CTGACGGCAA ACTTCGCGTG GCAGATCCCG
GCGCGCTACA ACATCGGCGT GGACGTGTGC GATAAATGGG CCGACGGTTC GGGCCGTCTC
GCGCTGATCT ACGAAGATCC CGAGGGCACT GCGACCCGCT ATACGTTCGA CGAGTTGAAA
GCGCTGTCCG ACCGCTTCGC CAACGCGCTG CTCGCAGCGG GTGCGCAACG CGGCGACCGG
ATCGGCATCT TCCTGTCGCA ATCCGTCGAA ACGGCTATCG CGCATCTCGC CGCCTACAAG
GCCGGCATGG TGGCCGTGCC GCTGTTCGCG CTGTTCGGCG TCGATGCGAT CGAACATCGG
CTCGGCGATA GTGGCGCCGT GGCGCTGATT ACCGATCACG GCGGCGTGCA GAAGGTCGAC
GAAATCCGCG CGGCGTTGCC GTCGCTGCGC AATGTTTTCA GCGTGGATAT CGATCGGGAC
AACGGCGATC CGCATGCGCC GGTGCGTTCG TTCTGGCACG CGCTGAAGAG CGCGCCCGCG
GGTTTCACAC CCGTCGATAC CGGCGCGGAC GATCCCGCGG TGATCATCTA TACGTCGGGC
ACGACCGGCA AACCGAAGGG CGCGCTGCAT GGGCACCGCG TGTTGCCAGG CCACCTGCCG
GGCGTCGAGA TGTCGCAACA GGGCTTTCCC GCGCACGCCA CGCTGATCTG GACGCCCGCC
GACTGGGCAT GGATCGGCGG CCTGTTCGAC GTGCTCTTGC CCTCCTGGCA TCACGGCGTG
CCGGTACTCG CGCGCCGCTT TGCGAAATTC GACGGCGAGG CCGCGTTCGA TCTGATGGCG
CGTCACGCGG TCTCGCATAC GTTTCTGCCG CCCACCGCAT TGAAGATGAT GCGCGGCGTC
GAACGTCCCG AACGCTGGAG CCTCGCGTTG CGTTCGGTGG CGAGCGGCGG TGAATCGCTC
GGCGAGGAAT TGATCGGCTG GGGCCGCAAA GCGCTGGGCG TCACGATCAA CGAGTTCTAT
GGGCAGACGG AGTGCAACGT CGTGGTGTCA TCGTGCGCGG CGCTCTTCGA ACCGCGCTTC
GGCGCGATTG GCCGCGCGGT GCCGGGGCAT CATGTCGCGA TTGTCGATAT GGACGGCAAC
GAATTGCCGC CGGGCGCGAT CGGCGATATC GCGGTGGCCG CGCCCGATCC GGTCATGTTT
CTCGGCTACT GGGGCAACGA GGCGGCGACG CGCGAGAAAT TCCGCGGCAA GTTTCTGGTG
ACCGGCGACC TCGGCACATG CGACGCGGAC GGCTTCATCC GTTTTGTCGG CCGTGGCGAC
GACGTGATCA CGAGCGCCGG CTACCGCATC GGGCCGGCTT CGATCGAAGA CTCGCTGCTG
CGTCATCCGG CTGTTTCGAT GGCGGTCGTG ATCGGCGCGC CGGATCGCGA GCGCACCGAG
ATCGTGATGG CGTTCGTGGT GCTGAACCCC GGCTTTGCCG GCGACGCGGC GCTGGTGCGC
GAGATCCAGC AGCATGTCAA AACGCGTCTC GCGGCGCACG AGTATCCGCG CGAGATTCGC
TTTGTCGACA GCCTGCCGTT GACGGCGACC GGCAAGGTGA TCCGCAAAGC CTTGCGCGAG
GGACTGGAAC AGGACGCGGA CAATCCCGCG TCAAAACCCG AGCGCCGATG A
|
|---|
| Protein sequence | MNLDGQTYES LTANFAWQIP ARYNIGVDVC DKWADGSGRL ALIYEDPEGT ATRYTFDELK
ALSDRFANAL LAAGAQRGDR IGIFLSQSVE TAIAHLAAYK AGMVAVPLFA LFGVDAIEHR
LGDSGAVALI TDHGGVQKVD EIRAALPSLR NVFSVDIDRD NGDPHAPVRS FWHALKSAPA
GFTPVDTGAD DPAVIIYTSG TTGKPKGALH GHRVLPGHLP GVEMSQQGFP AHATLIWTPA
DWAWIGGLFD VLLPSWHHGV PVLARRFAKF DGEAAFDLMA RHAVSHTFLP PTALKMMRGV
ERPERWSLAL RSVASGGESL GEELIGWGRK ALGVTINEFY GQTECNVVVS SCAALFEPRF
GAIGRAVPGH HVAIVDMDGN ELPPGAIGDI AVAAPDPVMF LGYWGNEAAT REKFRGKFLV
TGDLGTCDAD GFIRFVGRGD DVITSAGYRI GPASIEDSLL RHPAVSMAVV IGAPDRERTE
IVMAFVVLNP GFAGDAALVR EIQQHVKTRL AAHEYPREIR FVDSLPLTAT GKVIRKALRE
GLEQDADNPA SKPERR
|
|---|
| |