Gene Bxe_A1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A1346 
Symbol 
ID4004115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp3428569 
End bp3430113 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content68% 
IMG OID637948288 
Productaromatic acid efflux system, outer membrane lipoprotein 
Protein accessionYP_559659 
Protein GI91784453 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.65009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTCTC CGGTACCTAA AGGGATCGCC GCAGCCGCGG TTCTTACGAT CCTATTAACA 
ATCGCCGGCT GTGCCAGTAC CGGAGGCGTC GCGCCGCAAG CGAGCGGAGT CCAGCCCGCT
TCGCTCGACG CCGGCAACGC GATCCGCGCC GCCAATGCGG ACGCCCAATG GCCGTCCGTC
GACTGGTGGC GCGCCTACAA CGATCCGCAA TTGAACGAGT GGATCGACGC GGCACAGGCC
GGCAATCCGA GCCTCGCGGC CGCCCAGGCA CGCGTGCGCG AAGCCATGTC GATGGCGGGC
GTCGCGCGTT CGGCGTTGTC GCCGCAAGTC AACGGCAACC TGTCGGTCCA GCGCCAGAAG
TGGTCCGACA ATGTCTACTA CGGCCCCGGC CCGCTCGCGG GCGAGCAATC GTGGAACAAC
ACCGGCACGC TCGGCCTGTC GTATCACCTC GATATCTGGG GCAAGGACAG GAACGCCGCC
GAGCGCGCGC TCGATGCCGC CCACGCGAGC GCGGCGGACG CCCGCGCCGC CCAGCTCGAA
CTGGAAGGCA ACGTGGTGCG CACATACATC GAGATGTCGA TGAACTACGC GCTGCTCGAC
ATCGCCAAGT CCACCTTGCA GCAGCAGCAA CAGATCGTGG ATCTGGCCAG CCGACGCCTG
AAAGGCGGCA TCGGCACGCA ACTGGAAGTG AGCCAGGCCG AAACGCCGCT GCCGGAATAC
GAACGCCAGA TCGACGAGAT CGAAGAAAAG ATCGCGCTTG GCCGCAATCA GCTGGCCGCG
CTGGCCGGCA AAGGTCCGGG CGCGGGCGAT TCGATCCAGC GCCCGACGCT TTCGCTGAAC
ACGCCGGCCG GGCTGCCGAG CGCATTGCCC GCGGACCTGA TCGGCCATCG GCCGGACGTG
GTGGCGGCGC GCTGGTCGGT CGCGGCGCAG GCGCGCGGTA TCGACGTCGC CAAGGCGGAC
TTCTATCCGG ACATCAACCT GCTGGCGTCG ATCGGCGGAT ATGCGGCAAT GGGGCCGCTG
TTCCAGTTCC TGAAGAATCC GTCGCACAGC TGGAGCGGCG GGCCGGCGCT GTCGCTGCCG
ATCCTCGACG GCGGCCGCCT GCGTTCGCAG CTCGGCGCGG CTTCGGCGGG CTATGACGAA
GCCGTCGACC GTTACAACCA GTCGATCGTC GGCGCGCTCA AGGACATTTC CGATCAGGTG
ATCCGGATCC GCTCGCTTGC GACCCAGGCC GAGGACGCCG ACCGTTCGGT CGCGACGGCC
CGCAAGAACT ACGATCTGTC GCGCGAAGGT TACCGGCGCG GGCTGACCGA CTATCTGAAC
GTGCTGATCG CGCAAAACCA GTTGCTGCAC GCGCAGGAAG GCGTGGCGAA GATTCAGGCC
GAACGGCTCG GCGCGCATGC GTCGCTGGTC ACGGCACTGG GCGGCGGACT CGACGACCCG
GCCAACGGTC CGCTGGCGAA CGAGACGCTG CCGGCGCACG GCAAGGGTAA GACGGTGGCG
CCCGGTTCGA CCGCCAGCGC CGAGCCGGCC AGGTCAGGAA GCTGA
 
Protein sequence
MQSPVPKGIA AAAVLTILLT IAGCASTGGV APQASGVQPA SLDAGNAIRA ANADAQWPSV 
DWWRAYNDPQ LNEWIDAAQA GNPSLAAAQA RVREAMSMAG VARSALSPQV NGNLSVQRQK
WSDNVYYGPG PLAGEQSWNN TGTLGLSYHL DIWGKDRNAA ERALDAAHAS AADARAAQLE
LEGNVVRTYI EMSMNYALLD IAKSTLQQQQ QIVDLASRRL KGGIGTQLEV SQAETPLPEY
ERQIDEIEEK IALGRNQLAA LAGKGPGAGD SIQRPTLSLN TPAGLPSALP ADLIGHRPDV
VAARWSVAAQ ARGIDVAKAD FYPDINLLAS IGGYAAMGPL FQFLKNPSHS WSGGPALSLP
ILDGGRLRSQ LGAASAGYDE AVDRYNQSIV GALKDISDQV IRIRSLATQA EDADRSVATA
RKNYDLSREG YRRGLTDYLN VLIAQNQLLH AQEGVAKIQA ERLGAHASLV TALGGGLDDP
ANGPLANETL PAHGKGKTVA PGSTASAEPA RSGS