| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1292 |
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| Symbol | |
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| ID | 4003271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 3498521 |
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| End bp | 3499888 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637948343 |
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| Product | multi anti extrusion protein MatE |
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| Protein accession | YP_559713 |
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| Protein GI | 91784507 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.110492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGACG CCGCGCGCGA CGCGGACCCA TCGGCAGCGG CGCCCGCCGT TCCGGTGCGC
TGGCACCGCC GGGTGCTGGC GCTGGCTTTT CCCATCGTCC TCGCCAATCT GACGCAGCCG
ATTCTCGGCG CCGTCGACAC GGCCGTCGCC GGTCATCTGG ACGGCGCGTC GTATCTCGGC
GGCGTGGCGC TCGGCGGCCT CTTTTTCAAC TTCGTGTTCT GGGGCTTCGG CTTCCTGCGC
ATGGGCACCA CCGGTCTGGT CGCGCAGGCG CACGGCGCGA ACGACCAGGC CGGCTTGCGC
AACAACGTCG TACGCGCGCT GCTGCTGGCG GCCGCGATCG GCGGCGCGGT GCTGGCGCTG
CAAATGCCGC TGATCGATTA CGCGTTGCGC GTGATCGGCG GTAGCGACGC GGTGCAGCGC
AACGCGCGGC TCTATTGCCA CGCGCGCATC TGGGCCGCCC CGCTCGCGCT CGGCAATTAC
GTCGTGCTCG GCTGGCTGCT CGGCACGCAG CAGGTGCGGC TCGCATTGCT CTCGCAGGTG
TTCATCAACA GTGTGAACAT CGTGGCGGTG CTGCTATACG TGTACGTGTT CGATTGGAGC
GTGGCCGGCA TCGGCGCGGC CACGGCCACC GCCGACGCGC TCGGCTTCGT GCTCGGCGCC
GCGCTGTTGT GGTACGGCAG GCCGCGCGGC CTGCCCGCGC TGAATCGCGC CGCGTTGTTC
GACGCCGCCG CCCTCAGGCG GCTGGTGGTG CTCAACCGCG ACATTTTCAT ACGCACGGTG
TGTCTGCTTT CGTCGTTCGG CTGGTTTGCG CATCTGGGCG CGCGGCAAGG CGACGCCACG
CTCGCCGCCA ACGCGCTGCT GCTCAATTTT CAGACCTTCA TGGCCTACGG ACTCGACGGC
TTCGCGCACG CCGCCGAAGC GCTGGTCGGC GCGGCGATCG GCGCGCGCGA CCGGCATGCG
TTCACGCAGG CGATCAAGGT GACGGCGCTG TGGTCCACGC TCGGCGCACT GGGGTTCTCG
CTGGTGTATT GGAGCGCGGG CTCGTGGATC GTCGAGCGTC TGACGGATCA GGCCGCCGTG
CGCGCCGCCG CCGAGATGTA TCTGCCGTGG GCCGCGCTCT CGCCGGTGGT GTCCGTGTGG
GGCTTTCTGC TCGACGGCGT GTTCATCGGC GCGACCCGCA CGCGCGAACT GATGACCTCG
ATGGTGGTGT CGTTTGCGCT GTTCGTGGCG GCCTCGTGGG CCTTGCTGGC GCTCTACGGC
AACCACGGCT TGTGGGCCGC GATGCTGCTG TTCATGGCGC TGCGCGGTCT CACGCTTGGC
CGCTATGTGC CCGCCGTCGT ACGCGGCATG GCCGGCGCGG CGGCGTAG
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| Protein sequence | MSDAARDADP SAAAPAVPVR WHRRVLALAF PIVLANLTQP ILGAVDTAVA GHLDGASYLG
GVALGGLFFN FVFWGFGFLR MGTTGLVAQA HGANDQAGLR NNVVRALLLA AAIGGAVLAL
QMPLIDYALR VIGGSDAVQR NARLYCHARI WAAPLALGNY VVLGWLLGTQ QVRLALLSQV
FINSVNIVAV LLYVYVFDWS VAGIGAATAT ADALGFVLGA ALLWYGRPRG LPALNRAALF
DAAALRRLVV LNRDIFIRTV CLLSSFGWFA HLGARQGDAT LAANALLLNF QTFMAYGLDG
FAHAAEALVG AAIGARDRHA FTQAIKVTAL WSTLGALGFS LVYWSAGSWI VERLTDQAAV
RAAAEMYLPW AALSPVVSVW GFLLDGVFIG ATRTRELMTS MVVSFALFVA ASWALLALYG
NHGLWAAMLL FMALRGLTLG RYVPAVVRGM AGAAA
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