| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1212 |
|---|
| Symbol | |
|---|
| ID | 4003854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 3578373 |
|---|
| End bp | 3579740 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637948428 |
|---|
| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
|---|
| Protein accession | YP_559793 |
|---|
| Protein GI | 91784587 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3344] Retron-type reverse transcriptase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.835307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATGC GGCAGGCCAT GCGTCAGATG CCCGCGCAAG CGGGGCGGGC GGGAGTAGCG
CGCGGTGAAG CCGCGCGTGT ACCCGTCAGC GACGAAGCCT GCGGCCCGCG GCGTGAGCCG
GAAAACACAG GGTCGGCGCT GCTGCAGGCA GCGCTGACGA GAGAGAACCT GCAACGGGCG
CTCAAACGGG TACGTGCCAA TAAAGGCGCA GCGGGCGTCG ACGGTCTGGA CATCGACCAA
ACGGCACGCC ATCTCGCGAC GGCCTGGCCC GGTATCCGTG AGCACCTGTT GCGGGGGACG
TACCGGCCGA GTCCGGTACG ACGGGTAGCG ATCCCTAAGC CGGACGGCGG CGAGCGCGAG
CTTGGCATCC CGACGGTGAC GGATCGGCTG ATCCAGCAGG CGCTGCTACA GGTACTGCAA
CCGATACTTG ATCCGAGCTT CAGCGAGCAC AGCCACGGCT TCCGGCCGGG GCGGCGTGCG
CAGGACGCGG TGCTTGCCGC GCAGGCGTAC GTGCAGTCCG GCCGGCGCGT GGTGGTGGAT
GTGGACCTGG AGAAGTTCTT CGACCGGGTC AACCACGACA TCCTGATCGA CCGCCTACAG
AAACGCATCG ATGACGCCGG GGTGATCCGG CTGGTGCGTG CGTATCTGAA CAGCGGGATC
ATGAGGGATG GCGTGGTGCA GGAGCGCGGG CAGGGGACGC CGCAAGGCGG ACCGCTGTCG
CCGCTGCTGG CCAATGTCTT GCTCGATGAG GTGGACAAGG CCTTGGAGCG GCGAGGCCAC
TGCTTCGTGC GCTATGCCGA CGACTGCAAC GTGTATGTGC GCAGTCGCCG GGCGGGAGCG
CGGGTGATGG CTTTGCTGCG GCGTCTGTAC GGCAAGTTGT GCCTGAAGGT CAATGAAGCC
AAGAGCGCGG TAGCCAGTGT GTTCGGCCGC AAGTTCCTGG GCTACAGCCT GTGGGTGGCC
CGGGGAGGAA CGGTCAAGCG CAAGGTGGCG GCCAAGCCGC TGGCGACGTT CAAGCAGCGG
GTGCGGCAAC TGACCCGGCG CCTGGGCGGG CGCAGCATGC AGGACGTGGT GCAAAGGCTG
CGACCTTATC TGCTGGGTTG GAAAGCGTAC TTCGGACTGG CGCAAACACC GAGGATCTGG
CGCGAGCTGG ACGAGGGGTT GCGTCATCGG CTGCGTGCGA TCCAGCTCAA GCAGTGGAAA
CGAGGGCCGA CCATGTTCCG GGAGTTGCGC GCGTTGGGCG CAAGCCCCGC CGTGGCGCAG
CGGGTGGCGG CCAATAGCCG CTGCTGGTGG CGCAACAGCG ACAAACTGCT CAACAGCGTG
TTGACGGTGG CATGGTTCGA CCGCCTGGGT CTACCCCGTC TGTCCTGA
|
|---|
| Protein sequence | MSMRQAMRQM PAQAGRAGVA RGEAARVPVS DEACGPRREP ENTGSALLQA ALTRENLQRA
LKRVRANKGA AGVDGLDIDQ TARHLATAWP GIREHLLRGT YRPSPVRRVA IPKPDGGERE
LGIPTVTDRL IQQALLQVLQ PILDPSFSEH SHGFRPGRRA QDAVLAAQAY VQSGRRVVVD
VDLEKFFDRV NHDILIDRLQ KRIDDAGVIR LVRAYLNSGI MRDGVVQERG QGTPQGGPLS
PLLANVLLDE VDKALERRGH CFVRYADDCN VYVRSRRAGA RVMALLRRLY GKLCLKVNEA
KSAVASVFGR KFLGYSLWVA RGGTVKRKVA AKPLATFKQR VRQLTRRLGG RSMQDVVQRL
RPYLLGWKAY FGLAQTPRIW RELDEGLRHR LRAIQLKQWK RGPTMFRELR ALGASPAVAQ
RVAANSRCWW RNSDKLLNSV LTVAWFDRLG LPRLS
|
|---|
| |