| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1155 |
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| Symbol | |
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| ID | 4002970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 3629619 |
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| End bp | 3631154 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637948480 |
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| Product | MFS efflux system, outer membrane porin |
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| Protein accession | YP_559845 |
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| Protein GI | 91784639 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0159689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCAC AACCGCTGCT CTCACAACTG CTGCGACAGG CAGGCACGGC ACTCTGCACG
ATCTCCCTGG TCGGTTGCGC GGTTGGTCCT GACTTCGTGA AACCCGACGA CAGGCTCGCA
GCCGTTCAAC TGTCGCCCAG GGCGGACTAC GCGCAGGCTC AGGAGACATC CGCCGCGAAC
TTCCCGTCTT CATGGTGGAC GTTGTTCAAC GATGACGTAC TGGCGGATCT GCAAGCCCGT
GCGCAGGCGG GCAACCTGAA CCTGCAGATG GCTTCCGAGC GCATCGAGCA AAGTCGGGCG
CAGTTGGGGA TTGCCTCCTC GCTGCTGCTG CCCAGTGTGG GTGCTTCGGC GGGCTATTCC
CGCGAGGCCA TCAGCGAGCA CGGCAAGTTT GCCGCGTTGG GTGCTCCGAC GAGCGCGAGC
GACTTCTGGC AGTTGGGATT CGACGCCAGT TGGGAACTCG ACCTATGGGG CCGCGCGCGT
CGATCGCGCG AAAGCGCCGC GGCCGCCTTC GAGGCCACGG TGTATGAGCG CGAGGCGGCA
CGCGTGGCCC TGTCCGCCGA GGTGGCCCGT ACCTATCTCC AATTGCGCGG CACGCAAGCG
CAACTGGACA TCACCCGGCA GAACCTGGAG GTTGCCGATC GCACGCTCCG CCTTGCCGAA
AGCCGTGAGC GCAATGGCGT CGCCACACGT TTTGAAACCG CTTCGGCGCG CGCGCAACTG
GCAACGGTCG AGGCGCTGGT ACCCGAATTG GTCCAGCGCC GCAACACGCT GATGAACGTC
CTGGCATTGC TGCTGGGAGA GCAGCCGCGC GCCCTCGATG CGCAGTTGCT TGAAGCGATG
CCTCTGCCGT CGCTTCCTTC CAATGTGCCG GTGGGCCTGC CCTCCGAATT GGCGCACAGG
CGGCCGGACA TACAGCGCGC CGAAGCCCAG CTCCATGCTG CGACGGCAGC CATCGGCGTC
GCCAAAGCCG ATTTCTACCC GCGAATCGGC CTCAAAGGCA GGGTCGGCGT CGAAGCCTTC
GAGTTCAACG ACCTCGACAG TTGGGATTCC CGGTTCTTCT CCGTCGGCCC CACGGTCTAT
CTTCCCATCT TCCAGGGCGG GCGTCTGAAG CAGCGCCTGG CGCTGAACGA GGCACGGCAA
AGAACTGCCG CCATCGGCTA CCGGCAGACG GTGCTGCAAG CCTGGCATGA AGTGGACAAC
GCCCTGGACG CCTGGGCAGC CCAGCAGAAC CGCCATGCCG AGTTGGTGGT TTCGTACGAG
CAGAACCAGC AGGCGCTGCA TGCTGCCGAG CGCGGCTATC AGGAAGGCGC TGCCGACTAC
CTGAACGTCC TGGCCGCACA GCGCGGTGTC CTCGCAAGCC AGACCAGCCT CAATGCCAGC
GCGACCAACG CCGCGCTCAC CCTGGTCAAT CTCTACAAAT CCCTGGGCGG TGGCTGGGAC
CCCGGCGCAT TCTCTTCCGA GCAGCAGACC GGCGGCGACG CGTCGCTGAC GACCGCTGTG
TCGTCGGCCA CCTCGCAATC GAAGGTTGAC CAATGA
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| Protein sequence | MTSQPLLSQL LRQAGTALCT ISLVGCAVGP DFVKPDDRLA AVQLSPRADY AQAQETSAAN
FPSSWWTLFN DDVLADLQAR AQAGNLNLQM ASERIEQSRA QLGIASSLLL PSVGASAGYS
REAISEHGKF AALGAPTSAS DFWQLGFDAS WELDLWGRAR RSRESAAAAF EATVYEREAA
RVALSAEVAR TYLQLRGTQA QLDITRQNLE VADRTLRLAE SRERNGVATR FETASARAQL
ATVEALVPEL VQRRNTLMNV LALLLGEQPR ALDAQLLEAM PLPSLPSNVP VGLPSELAHR
RPDIQRAEAQ LHAATAAIGV AKADFYPRIG LKGRVGVEAF EFNDLDSWDS RFFSVGPTVY
LPIFQGGRLK QRLALNEARQ RTAAIGYRQT VLQAWHEVDN ALDAWAAQQN RHAELVVSYE
QNQQALHAAE RGYQEGAADY LNVLAAQRGV LASQTSLNAS ATNAALTLVN LYKSLGGGWD
PGAFSSEQQT GGDASLTTAV SSATSQSKVD Q
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