| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1007 |
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| Symbol | rimM |
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| ID | 4003985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 3775393 |
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| End bp | 3776127 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637948630 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_559992 |
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| Protein GI | 91784786 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.571719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGC GTGATTCCGG TAGTTCAGGT CCCGTGAAGG CAAAAGCTGC GGCCCCGCGC
GCAAAGACGT CTGGTCAGGC GCCGTTCGGT GCCTTCGTCC GCAAGCCGGT CGAAAAAACC
GAAGGCAAGG CGAAAGCCAA TGCGGCAAAC GCCGGTTCCG GTGCAACAGA AATGCGCATG
GAAACGGCAG AAAGCTGGCC GGTCGATGCG GTCGAGGTCG GCGCAATCGT CGACGCTTAC
GGCCTCAAAG GCTGGGTCAA GGTAGCCGCT CATGCGGATG CCGGCCACGG CGGCGACGCT
TTGCTGAGCG CGAAGCGCTG GTGGCTGCTC AAAGGCCAGG AGCGCAAATC GGCGCCGTCG
TTGCAGGCGA AAACGCATAG CGACAGTGTG GTGGCCCATC TGGGCGGCGT CACTGACCGC
GATGTGGCGC TGGCACTGCG CGGCTCCCGC GTCTATATCA GCCGCAGCGA GTTTCCGGCT
CTCGGAGCCG ACGAATTCTA CTGGGTCGAC CTGCTCGGCC TGGACGTGGT GAACGTTGCC
GGAGTCAGTC TCGGCAAGGT TGCAGACATG ATCGACAACG GTGCGCACTC GGTGTTGCGT
ATCGAATATC CGGCTACCGA CAAAAGCGGC AAGCCGGTCA CCGGTGAGCG TTTGATCCCG
TTCGTCGGCG TCTTTGTCAA AACAGTGGAC CAGGCGGCGA AGCAGATCAC CGTCGACTGG
GAAGCTGATT ACTAA
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| Protein sequence | MSERDSGSSG PVKAKAAAPR AKTSGQAPFG AFVRKPVEKT EGKAKANAAN AGSGATEMRM
ETAESWPVDA VEVGAIVDAY GLKGWVKVAA HADAGHGGDA LLSAKRWWLL KGQERKSAPS
LQAKTHSDSV VAHLGGVTDR DVALALRGSR VYISRSEFPA LGADEFYWVD LLGLDVVNVA
GVSLGKVADM IDNGAHSVLR IEYPATDKSG KPVTGERLIP FVGVFVKTVD QAAKQITVDW
EADY
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