| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1003 |
|---|
| Symbol | |
|---|
| ID | 4003989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3778571 |
|---|
| End bp | 3779716 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637948634 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_559996 |
|---|
| Protein GI | 91784790 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1533] DNA repair photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.850299 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACT CCGACTCCCA ACCCGTCAAC GAATTTCCGA TCGCGCCGCC CGCGCCTCGC
AAGGGGCGCG GTGCGGTGAC GAACCTGCAA GGTCGCTACG AAGTCGACCA GCGCGAAGCA
ATTGACGACG GCTGGCTGTC GCTGGCGGAA GATGATGACG AGCCGAAGGT CTTGCGCACG
CAGGTCTTCG AGGAACGCGC CAAAACTATT CTCACGCGCA ATGCGTCGCC GGATATTCCT
TTCGGTGTGT CGCTGAATCC GTATCGCGGT TGCGAGCACG GCTGCATCTA TTGTTTTGCT
CGGCCCACGC ACAGTTATCT GGGGCTCTCG CCAGGGCTCG ACTTCGAAAG CCGGATCTAT
GCCAAGGTCA ACGCGCCGGA GTTGCTCGAG CGGGAGCTGT CGAAAAAGTC CTACGTGCCG
GAGCCCATTG CGCTCGGTGT GAATACAGAC GCCTGGCAGC CCGCCGAGCG CGACTTGCAA
CTCACGCGCC GTGTAATCGA AGTGCTCAGC GAGCGGCATC ATCCGTTTGC GGCGATCACC
AAGTCTTCGC TGATCGAACG CGATCTCGAT CTGCTGGCGC CTATGGCGGC GCGCGGGCAA
TTCATGGCGG CCATTACCAT CACTACGCTG GACGCCGGGA TCGCCCGCAC GCTCGAACCG
CGCGCGGCCA CACCGTCGCG GCGGCTGCGC ACCATTCGCA CGTTGAGCGA GGCCGGCATT
CCGGTCGGCG TCAGCATCGC GCCGGTGATT CCGTTCGTCA CCGAACCTGA CATGGAGCGC
GTGCTGGAGG CCTGTGCGGA GGCCGGGGCA AGCAATGCGA GCTATATCGT GCTGCGTCTG
CCGTGGGAAG TCGCGCCGCT ATTCAAGGAC TGGCTGGCGG CGTATTTTCC GGATCGCGCC
GAACGGGTCA TGGGGCGGGT GCGGGACATG CGGGGCGGGA AAGACTACGA CTCGTCGTTT
TCCACACGCA TGAAGGGGGA GGGCTTGTGG GCGGATCTGC TCAAGCAGCG ATTCCACAAG
GCGGTGCGCC GCCTGGGCCT GAACCGGCGC GACCGCGGCA TTCTCGATAT GTCGCACTTT
CGCCGGATTG AGCCGCCGCG TGCCGGCCAA CCGGCGCGCA ACGACTCTCA ACTGGATCTT
TTTTAG
|
|---|
| Protein sequence | MTDSDSQPVN EFPIAPPAPR KGRGAVTNLQ GRYEVDQREA IDDGWLSLAE DDDEPKVLRT
QVFEERAKTI LTRNASPDIP FGVSLNPYRG CEHGCIYCFA RPTHSYLGLS PGLDFESRIY
AKVNAPELLE RELSKKSYVP EPIALGVNTD AWQPAERDLQ LTRRVIEVLS ERHHPFAAIT
KSSLIERDLD LLAPMAARGQ FMAAITITTL DAGIARTLEP RAATPSRRLR TIRTLSEAGI
PVGVSIAPVI PFVTEPDMER VLEACAEAGA SNASYIVLRL PWEVAPLFKD WLAAYFPDRA
ERVMGRVRDM RGGKDYDSSF STRMKGEGLW ADLLKQRFHK AVRRLGLNRR DRGILDMSHF
RRIEPPRAGQ PARNDSQLDL F
|
|---|
| |