Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A0980 |
Symbol | |
ID | 4003034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 3803001 |
End bp | 3804305 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637948657 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_560019 |
Protein GI | 91784813 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.466756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTCC TCGATCTCGG ACCGTTCTCT CGCGCGTCCG GCACGATTCG TCTGCCTGGC TCGAAGAGCA TCTCGAACCG GGTGCTGCTG CTCGCGGCGC TCGCCGAAGG CGAAACGACG ATCACGAACC TGCTCGACTC CGACGACACC CGCGTGATGC TCGACGCGCT CGAAAAACTC GGTGTGCGTC TGAAGCGCGA CGGCGACACC TGCGTCGTGA CCGGCACGCG CGGCGCATTC ACGGCGCGCA CGGCGGATCT GTTTCTCGGC AACGCCGGCA CGGCGGTGCG TCCGCTGACG GCGGCGCTGG CGGTCAATGG TGGCGACTAT CGGATTCACG GCGTGCCGCG CATGCACGAG CGGCCGATCG GCGATCTGGT CGACGGCCTG CGCCAACTCG GCGCGAAGAT CGACTACGAA GAGAACGAAG GCTATCCGCC GCTGCGGATT CGCCCCGGGC AGATCAATGC CGACGCGCCG ATCACCGTGC GCGGCGACGT GTCGAGCCAG TTCCTGACCT CGCTTCTCAT GACGCTGCCG CTCGTGCGGA CCGGAAGCGG CGTGAGCACC GTGCAGGTGG ACGGCGAACT GATCTCGAAG CCGTACATCG AGATCACCCT CAAGCTGATG GAGCGCTTCG GCATCAAGGT CGAACGCCAC GGCTGGCATC AGTTCGTCGT GCCGGCGGGG CAGCGCTATC AGTCGCCGGG CAGCATCATG GTGGAGGGCG ACGCGTCGTC CGCTTCGTAT TTCCTCGCGG CCGGCGCGCT CGGCGGCGGG CCGCTGAAAG TGGAGGGCGT CGGCCGGGCC AGCATCCAGG GCGACGTCGG CTTTGCCGAT GCGCTCATCA GGATGGGCGC GAACCTGCAG ATGGGCGACG ACTGGATCGA GGTGCGCGGC GTCGGCCACG ACAGCGGCAA GCTCGAGCCG ATCGACATGG ACTGCAACCT GATTCCCGAC GCTGCAATGA CGATCGCTGT CGCGGCCCTG TTCGCGGACG GCGCCACCAC GCTGCGCAAT ATCGCCAGTT GGCGCGTGAA GGAAACCGAC CGGCTCGCCG CAATGGCGAC CGAACTGCGC AAGGTCGGCG CCAAGGTGAA GGAAGGCGAG GACTTCATCA TCATCGAGCC GCCTGAAAAG CTGATTCCGA ACGCCGCCAT CGACACCTAC GACGATCACC GCATGGCCAT GTGCTTCTCG CTGGTGAGTC TCGGCGGCGT ACCGGTCCGT ATCAACGACC CGAAGTGCGT CGGCAAGACT TTTCCCGATT ATTTCGAGCG CTTCATTGCG CTTGCTCAAC CCTGA
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Protein sequence | MEFLDLGPFS RASGTIRLPG SKSISNRVLL LAALAEGETT ITNLLDSDDT RVMLDALEKL GVRLKRDGDT CVVTGTRGAF TARTADLFLG NAGTAVRPLT AALAVNGGDY RIHGVPRMHE RPIGDLVDGL RQLGAKIDYE ENEGYPPLRI RPGQINADAP ITVRGDVSSQ FLTSLLMTLP LVRTGSGVST VQVDGELISK PYIEITLKLM ERFGIKVERH GWHQFVVPAG QRYQSPGSIM VEGDASSASY FLAAGALGGG PLKVEGVGRA SIQGDVGFAD ALIRMGANLQ MGDDWIEVRG VGHDSGKLEP IDMDCNLIPD AAMTIAVAAL FADGATTLRN IASWRVKETD RLAAMATELR KVGAKVKEGE DFIIIEPPEK LIPNAAIDTY DDHRMAMCFS LVSLGGVPVR INDPKCVGKT FPDYFERFIA LAQP
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