| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0820 |
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| Symbol | ispH |
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| ID | 4003223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 3971420 |
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| End bp | 3972379 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637948810 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_560166 |
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| Protein GI | 91784960 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.86582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATGA CGGATACGAC TCTTGCTGAA ACCGAGATCC TGCTAGCGCA GCCGCGCGGG
TTCTGTGCCG GTGTCGACCG GGCGATCGAG ATCGTAGAGC GGGCCATCAA GCTGCACGGC
TCGCCGATCT ACGTGCGTCA CGAAATCGTC CATAACGCGT ACGTGGTCGA GGATCTGCGC
AAGAAGGGTG CGATCTTCAT CGAGCGGCTC GAAGAAGTGC CGCCCGGCAA CACGGTTATT
TTCAGCGCGC ACGGCGTGTC GAAGGCAGTG CGTTCCGAGG CCGAGATTCG CGGGCTGCGG
GTGTACGACG CCACGTGCCC GCTCGTGACC AAGGTGCATA TCGAGGTCGC GAAGATGCGC
CAGGACGGCT TCGACATCGT CATGATCGGC CACAAGGGCC ATCCCGAAGT CGAAGGCACG
ATGGGCCAGG CGGGCGAGGG CATGCATCTG GTGGAAGACA TCGAAGACGT ACAGGCCTTG
CAACTGGCCG ATCCCGAGCG GATTGCATTC GTCACGCAAA CCACCCTGTC GGTCGACGAC
GCAGCCCAGA TCATTGCCGC TCTGAAGGCC AAATATCCGT CCATCCGCGA GCCGAAAAAG
CAGGATATCT GCTACGCCAC GCAAAACCGC CAGGACGCGG TGAAGTTCAT GGCGCCGCAA
TGCGACGTCG TGATCGTGGT CGGCAGCCCG AACAGCTCGA ACTCCAACCG GCTGCGCGAG
CTGGCCGAGA AGCTCGGCGT GCCTGCCTAT ATGGTGGACT CGCCCGATCA GATCGATCCG
GTCTGGGTCG AAGGCAAACG CCGCATCGGC GTAACGGCCG GCGCCTCGGC GCCGGAAGTG
CTGGCGCAGG CGGTGATCGC CCGCCTGCGT GAGCTCGGCG TGCGCAATGT GCGCGCGCTC
GACGGCATCG AGGAAAACAT TGCGTTTCCG CTACCGCGCG GTTTGGGTCT GCCCGCCTGA
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| Protein sequence | MSMTDTTLAE TEILLAQPRG FCAGVDRAIE IVERAIKLHG SPIYVRHEIV HNAYVVEDLR
KKGAIFIERL EEVPPGNTVI FSAHGVSKAV RSEAEIRGLR VYDATCPLVT KVHIEVAKMR
QDGFDIVMIG HKGHPEVEGT MGQAGEGMHL VEDIEDVQAL QLADPERIAF VTQTTLSVDD
AAQIIAALKA KYPSIREPKK QDICYATQNR QDAVKFMAPQ CDVVIVVGSP NSSNSNRLRE
LAEKLGVPAY MVDSPDQIDP VWVEGKRRIG VTAGASAPEV LAQAVIARLR ELGVRNVRAL
DGIEENIAFP LPRGLGLPA
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