Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A0779 |
Symbol | |
ID | 4005612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 4020004 |
End bp | 4021452 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637948851 |
Product | major facilitator superfamily drug efflux pump |
Protein accession | YP_560207 |
Protein GI | 91785001 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.497284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACGC CGACTTCGTC CGCTCCCACG CCCAGTACTC CTTCCGCCCG CTCGCTCACG GTAATGCTGT GGGTCGTCGC TACCGGCTTC TTCATGCAGA CGCTCGACTC GACCATCGTC AACACCGCGC TCCCCGCGAT GGCGACGAGC CTCGGCGAAT TGCCGCTGCG CATGCAATCG GTGGTGATCG CCTATTCGCT GACGATGGCC GTGATGATCC CGGTATCCGG CTGGCTCGCC GACAAGCTCG GCACACGCCG CGTGTTCTTC AGCGCGATCC TGGTGTTCGC AGTCGCCTCG TTGCTGTGCG CGAACGCGCA CACCCTGAAT CAGCTCGTGG CTTTCCGCAT CATGCAAGGC GTGGGCGGCG CGATGCTGTT GCCGGTTGGA CGGCTCGCGG TACTGCGCAC CTTTCCGGCA GAACGCTATT TGCCGGCGCT CTCGTTCGTG GCGATCCCCG GTCTGATCGG ACCGCTGATC GGCCCCACGC TCGGCGGCTG GCTCGTGAAG ATCGCCTCGT GGCACTGGAT CTTTCTGATC AACGTGCCGG TGGGCATAGT CGGGTGCATT GCCACGTTCA TCTTCATGCC GGATAGCCGC AACGAGCACG TCGGCAAGTT CGATATGAAA GGCTACCTGC TGCTGATCCT GGGCATGGTG GCAATTTCGT TCGCACTCGA CGGCCGCACC GAATTCGGCA TTCAGCACGC CACGGTGCTG GTGCTGCTGA TCCTGAGCCT TGCCTGCTTT GTTGCCTACG GCTTGCACGC CGTGCGCGAG CCCTCGCCGA TTTTCTCGCT AGACCTCTTC AAGATCCACA CCTTCAGCGT GGGCCTGCTC GGCAATCTGT TCGCACGGAT CGGCAGTGGC GCAATGCCTT ATCTGATTCC TCTGCTATTG CAGGTGAGTC TCGGCTATAG CGCCTTCGAA GCCGGCCTGA TGATGCTGCC GGTGGCGGCC GCGGGCATGG CGTCCAAACG TCTCGTGACG ACGCTGATCA TCAAGTACAG CTACCGGCGC GTGCTGATCA TCAACACGGT GCTGGTCGGC CTGACGATGG CAAGCTTCGC GCTCACCGCC GCGAATCAGC CGCTGTGGCT GCGGCTCGTG CAACTGGCAC TTTTCGGCGG CGCCAACTCG ATTCAGTTCA CGGCAATGAA CACGTTGACA CTCAAGGACC TGGGCACCGG TGGAGCGAGC AGCGGCAACA GCCTGTTTTC GCTGGTCCAG ATGCTGTCGA TGAGTCTCGG CGTGACGGTA GCCGGCGCCC TGCTCGCCAC CTTCACCGGC CTGCTGCCGC GTGTGACGGC CGCCAATTCG CTGCCCGCAT TTCACGCGAC TTTCCTGTGT GTCGGCATCA TTACGGCAGG CTCTTCGTGG ATCTTTGCGC AACTGTCGCC GGACATCCGC ACACCCGCGA AAAAGACCGA TCCCTCCGAA CGCACCTGA
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Protein sequence | MSTPTSSAPT PSTPSARSLT VMLWVVATGF FMQTLDSTIV NTALPAMATS LGELPLRMQS VVIAYSLTMA VMIPVSGWLA DKLGTRRVFF SAILVFAVAS LLCANAHTLN QLVAFRIMQG VGGAMLLPVG RLAVLRTFPA ERYLPALSFV AIPGLIGPLI GPTLGGWLVK IASWHWIFLI NVPVGIVGCI ATFIFMPDSR NEHVGKFDMK GYLLLILGMV AISFALDGRT EFGIQHATVL VLLILSLACF VAYGLHAVRE PSPIFSLDLF KIHTFSVGLL GNLFARIGSG AMPYLIPLLL QVSLGYSAFE AGLMMLPVAA AGMASKRLVT TLIIKYSYRR VLIINTVLVG LTMASFALTA ANQPLWLRLV QLALFGGANS IQFTAMNTLT LKDLGTGGAS SGNSLFSLVQ MLSMSLGVTV AGALLATFTG LLPRVTAANS LPAFHATFLC VGIITAGSSW IFAQLSPDIR TPAKKTDPSE RT
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