Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A0750 |
Symbol | xerD |
ID | 4005641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 4051919 |
End bp | 4052854 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637948880 |
Product | site-specific tyrosine recombinase XerD |
Protein accession | YP_560236 |
Protein GI | 91785030 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGATA CCTTGATCGA CGACGCGCCC GCCGCGTCAC CTCTCTTTGT TGCCAGCTCG GCGTCGATCG ACGCATTCTG CGACGCGCTG TGGCTCGAAC ATGGCCTGTC GCGCAACACG CTCGACGCGT ACCGCCGCGA TCTGCGTCTC TTTTGCGAAT GGCTCGCGCA GAGCCGCAAT GCTTCGCTCG ACACCGCAAG CGAAGCCGAT CTGAACGCGT ATAGCGCTGC ACGGCAGAAG GACAAATCGA CCTCGGCGAA CAGGCGGCTC TCGGTGTTTC GCCGCTACTA CGGCTGGGCG GTGCGCGAGC ATCGCGCGAA GGTCGATCCG ACGGTGCGCA TCCGTTCGGC GAAACAGCCG CCGCGTTTTC CGTCCACGCT CACCGAAGCG CAAGTCGAAG CGCTGCTCGG CGCGCCCGAC GTCGATACGC CGTTGGGTCT GCGCGACCGT ACGATGCTGG AGCTGATGTA CGCGAGCGGT CTGCGCGTGA CCGAACTCGT CACGCTGAAA ACCGTGGAAG TGGGCCTGAA CGAGGGCGTG GTGCGCGTCA TGGGCAAAGG CTCGAAGGAG CGCCTGATTC CGTTCGGCGA AGAGGCGCAC GGCTGGATCG AACGCTATCT GCGCGAGGCG CGGCCCGCAT TGCTCGGCGC GCGCGCGACA GACGCGCTGT TCGTGACGGG CCGCGCGGAG GGTATGACGC GCCAGCAGTT CTGGAACATC ATCAAGCGTC ACGCGGCGGC GGCCGGTGTG AATGCGCCGT TGTCGCCGCA CACGTTGCGG CACGCGTTCG CCACGCATCT GCTCAATCAC GGCGCCGACC TGCGTGTCGT GCAACTGCTG CTCGGCCACA CGGATATTTC GACCACGCAG ATCTACACGC ACGTGGCCCG TGAACGGTTG AAGTCGCTGC ATGCGCAGCA TCATCCGCGG GGTTGA
|
Protein sequence | MSDTLIDDAP AASPLFVASS ASIDAFCDAL WLEHGLSRNT LDAYRRDLRL FCEWLAQSRN ASLDTASEAD LNAYSAARQK DKSTSANRRL SVFRRYYGWA VREHRAKVDP TVRIRSAKQP PRFPSTLTEA QVEALLGAPD VDTPLGLRDR TMLELMYASG LRVTELVTLK TVEVGLNEGV VRVMGKGSKE RLIPFGEEAH GWIERYLREA RPALLGARAT DALFVTGRAE GMTRQQFWNI IKRHAAAAGV NAPLSPHTLR HAFATHLLNH GADLRVVQLL LGHTDISTTQ IYTHVARERL KSLHAQHHPR G
|
| |