Gene Bxe_A0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A0720 
Symbol 
ID4005690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp4085278 
End bp4086600 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content62% 
IMG OID637948910 
ProductABC sugar transporter, periplasmic ligand binding protein 
Protein accessionYP_560266 
Protein GI91785060 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.41977e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAG CCCTCAAATC CACGCTAAAG GCGGTCAGTG CCGGCGCTGT CGCATGCTTT 
GCATTGAACG CGTCGGCGGC CACGGTGACG ATCGCCACGC TGAACAATCC GGACATGATC
GAGCTGAAGA AGCTCTCGCC CGAATTCGAA AAGGCGAATC CGGACATCAA GCTGAACTGG
GTGATTCTCG AAGAAAACGT GCTGCGTCAG CGCGCCACCA CCGACATCAC GACCGGCAGC
GGCCAGTTCG ACGTGATGAC GATCGGCGCG TACGAAACGC CGCAATGGGG CAAGCGTGGC
TGGCTCACGC CGCTCACCAA TCTGCCCGCC GATTACGATC TGAACGACGT CGTGAAGACC
GCCCGCGATG GCCTCTCTAG CGGCGGCCAG TTGTATGCGC TGCCGTTCTA CGTCGAAAGC
TCGATGACGT ATTACCGCAA AGACCTGTTC GCGGCCAAAG GTCTGAAGAT GCCCGATCAG
CCCACTTACG ACCAGATCGC GCAATTCGCC GACAAGCTTA CCGACAAGGC CAACGGCATT
TACGGCATCT GCCTGCGCGG CAAGGCGGGC TGGGGCGAGA ACATGGCTTA CGGCACGACG
GTGGTGAATA CCTTCGGCGG CCGCTGGTTC GACGAGAAGT GGAACGCGCA GCTCACCTCG
CCGGAATGGA AGAAGGCGAT CACCTTCTAC GTCAACCTGC TGAAGAAAGA CGGCCCTCCG
GGAGCGAGCT CGAACGGCTT CAACGAGAAT CTCACGCTGA TGTCGTCCGG CAAGTGCGCG
ATGTGGATCG ACGCGACGGT CGCGGCCGGC ATGCTCTACA ACAAGCAGCA ATCGCAGATC
GCCGACAAGG TGGGGTTTGC CGCGGCGCCG ATCGCGGTCA CGCCGAAGGG ATCGCACTGG
CTATGGGCCT GGGCGCTGGC GATTCCGAAA TCGTCGAAGC AGACCGACGC GGCGAAGAAG
TTCATTACGT GGGCCACGTC GAAGCAGTAC ATTGAACTGG TCGCGAAGGA CGAAGGCTGG
GCCTCGGTGC CGCCGGGAAC GCGTCAATCC ACGTACGCTC GCCCCGAGTA CAAGCAAGCC
GCGCCGTTCG GCGACTTCGT GCTGAAGGCG ATCGAAACGG CAGATCCGGA TCATCCGACG
CTCAAGCCGG TGCCGTACAC CGGTGTGCAG TTCGTCGGGA TTCCTGAGTT CCAGTCGTTC
GGCACGGTGG TCGGTCAGAG CATCTCCGGT GCGATTGCCG GTCAGATGAC GGTCGACCAG
GCGCTGGCAG CGGGCAACGC CACGGCGGAT CGTGCGGTGA AGCAGGCCGG CTACCAGAAG
TAA
 
Protein sequence
MKPALKSTLK AVSAGAVACF ALNASAATVT IATLNNPDMI ELKKLSPEFE KANPDIKLNW 
VILEENVLRQ RATTDITTGS GQFDVMTIGA YETPQWGKRG WLTPLTNLPA DYDLNDVVKT
ARDGLSSGGQ LYALPFYVES SMTYYRKDLF AAKGLKMPDQ PTYDQIAQFA DKLTDKANGI
YGICLRGKAG WGENMAYGTT VVNTFGGRWF DEKWNAQLTS PEWKKAITFY VNLLKKDGPP
GASSNGFNEN LTLMSSGKCA MWIDATVAAG MLYNKQQSQI ADKVGFAAAP IAVTPKGSHW
LWAWALAIPK SSKQTDAAKK FITWATSKQY IELVAKDEGW ASVPPGTRQS TYARPEYKQA
APFGDFVLKA IETADPDHPT LKPVPYTGVQ FVGIPEFQSF GTVVGQSISG AIAGQMTVDQ
ALAAGNATAD RAVKQAGYQK