| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0552 |
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| Symbol | pyrF |
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| ID | 4005859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4273405 |
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| End bp | 4274220 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637949078 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_560433 |
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| Protein GI | 91785227 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.655653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCATT TCATCCAGAC ACTCAACGAC GCCTGGCAGC GCACCAACTC GCTGCTGTGC
GTCGGCCTCG ATCCCGAGCC CAGCAAATTC CCGGGCGCGC TCGCGGGCCG TCCCGAGGCG
ATTTTCGACT TCTGCCGCAC GATCGTCGAT GCGGCCGCGC CGTACGCGTC GTCGTTCAAA
CCGCAGATTG CCTACTTCGC GGCGCATCGA GCGGAAGACC AGCTCGAGCA GTTGATCGCT
CACATTCATG CGAACCATCC GGGCTTGCCG GTGATTCTCG ACGCGAAGCG CGGCGACATC
GGCAGCACAG CCGAGCAGTA TGCGCGCGAG GCATTCGAGC GCTATCAGGC CGACGCGGTG
ACGGTGAATC CGTACATGGG TTTCGATTCG ATCCAGCCGT ATCTGGAGCA CGAAGGCAAA
GGCGTGATCG TGCTGTGCCG CACGTCGAAC GCGGGCGGCT CCGACCTGCA ATTCCTGGAA
ACCGGCGGCC GGCCGCTCTA TCAGGTCGTC GCGCAACTGG CGGCGGACAA ATGGAACGCG
AGCGGTCAAC TGGGTCTGGT GGTCGGCGCG ACGTTCCCGA AGGAAATCGA AGTGGTGCGC
GGGATTGTCG GCGATATGCC GCTGCTGATT CCGGGCATCG GCGCGCAAGG CGGCGACGTG
CAGGCCACGG TCAACGCCGG CCGCACCGCG AATGGCACGG GCATGCTGAT CAACTCATCG
CGAGCGATTA TTTACGCGGG CAAGGACGAC GATTTCGCCG AAGCCGCGGC AAAGGCCGCG
ATGGAAACGC GTGACCGGAT CAACACGTTC CGGTAA
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| Protein sequence | MSHFIQTLND AWQRTNSLLC VGLDPEPSKF PGALAGRPEA IFDFCRTIVD AAAPYASSFK
PQIAYFAAHR AEDQLEQLIA HIHANHPGLP VILDAKRGDI GSTAEQYARE AFERYQADAV
TVNPYMGFDS IQPYLEHEGK GVIVLCRTSN AGGSDLQFLE TGGRPLYQVV AQLAADKWNA
SGQLGLVVGA TFPKEIEVVR GIVGDMPLLI PGIGAQGGDV QATVNAGRTA NGTGMLINSS
RAIIYAGKDD DFAEAAAKAA METRDRINTF R
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