Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A0516 |
Symbol | |
ID | 4005895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 4309741 |
End bp | 4311108 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637949114 |
Product | signal recognition particle subunit FFH/SRP54 (srp54) |
Protein accession | YP_560469 |
Protein GI | 91785263 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACA ATCTGACTCA ACGGATGGCG CGCGTCGTCA AGACGCTGCG CGGCGAAGCC CGGCTTACCG AGGCGAACAC CCAGGAAATG CTGCGCGAAG TGCGTCTCGC ACTGCTCGAG GCCGACGTGG CGCTGCCCGT CGTGCGCGAG TTCATCGCCA AGGTCAAGGA AAAGGCGCTC GGCGAGGAAG TCATCAGCAG CCTCTCGCCG GGCCAGGCGC TGGTCGGCGT GGTGCAGCGC GAGCTGACCG CGATCATCGG CGGCGACTAC GAAGGCAAGG CGGTCGAACT CAACCTCGCC GTCACGCCGC CGGCCGTCAT CCTGATGGCG GGCCTGCAGG GCGCGGGTAA AACGACCACG GTCGGCAAGC TCGCCAAGCT GCTGCGTGAG AAGTACAAGA AGAAAGTACT GACCGTGTCG TGCGACGTCT ACCGCCCCGC CGCTATCGCG CAGTTGAAGA CGGTGACCGA GCAGGTCGGT GCGGATTTCT TCCCGTCGGA ACCGGACCAG AAGCCGGTGG ACATCGCGCG CGCCGCCGTG GATTGGGCCA GGCGCCACTA TCACGACGTG CTGCTGGTCG ACACGGCCGG CCGTCTCGGT ATCGACGAAG CGATGATGAA GGAAATCACC GCGCTGCACG CCGAGCTGAA ACCGGCGGAA ACGCTGTTCG TGGTCGACGC GATGCTCGGC CAGGACGCGG TGAACACCGC CAAGGCCTTT AGCGACGCGC TGCCGCTCAC CGGCGTGGTC CTCACCAAGC TCGACGGCGA CTCGCGCGGC GGTGCGGCGC TCTCCGTGCG CCATGTCACG GGCAAGCCGA TCAAGTTCGT CGGCGTCGCG GAAAAGCTCG ACGGCCTCGA AGTCTTCCAC CCGGATCGCA TGGCGAACCG GATTCTCGGC ATGGGCGACA TTCTTGCCCT CGTCGAAGAA GCGCAACGCG GTGTGGACGT TCAGGCTGCG CAGAAGCTCG CCGACAAGGT CAAGAAAGGC GGCGACTTCG ATCTGAACGA TTTCCGCGCC CAGCTGACGC AAATGAAGGG CATGGGCGGC CTGTCGTCGC TGATGGACAA ATTGCCCGCG CAATTTCAGC AGGCCGCCGC CGGCGCCGAC ATGGGCCAGG CCGAAAAGCA GATGCGCCGC ATGGAAGGCA TCATCAATTC CATGACGCCG CTGGAACGCG CCAAGCCCGA CCTGATCAAG GCCACGCGCA AGCGCCGCAT CGCCGCGGGT GCGGGCGTGC AGGTCCAGGA AGTCAACCGC ATGCTGAATC AGTACGACCA GATGCGCACC ATGATGAAAA AGCTCAAGGG CGGCAACCTG CAGAAGATGA TGCGCGGCAT GAAGGGCATG TTGCCCGGCA TGCGCTAA
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Protein sequence | MLDNLTQRMA RVVKTLRGEA RLTEANTQEM LREVRLALLE ADVALPVVRE FIAKVKEKAL GEEVISSLSP GQALVGVVQR ELTAIIGGDY EGKAVELNLA VTPPAVILMA GLQGAGKTTT VGKLAKLLRE KYKKKVLTVS CDVYRPAAIA QLKTVTEQVG ADFFPSEPDQ KPVDIARAAV DWARRHYHDV LLVDTAGRLG IDEAMMKEIT ALHAELKPAE TLFVVDAMLG QDAVNTAKAF SDALPLTGVV LTKLDGDSRG GAALSVRHVT GKPIKFVGVA EKLDGLEVFH PDRMANRILG MGDILALVEE AQRGVDVQAA QKLADKVKKG GDFDLNDFRA QLTQMKGMGG LSSLMDKLPA QFQQAAAGAD MGQAEKQMRR MEGIINSMTP LERAKPDLIK ATRKRRIAAG AGVQVQEVNR MLNQYDQMRT MMKKLKGGNL QKMMRGMKGM LPGMR
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