Gene Bxe_A0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A0516 
Symbol 
ID4005895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp4309741 
End bp4311108 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content65% 
IMG OID637949114 
Productsignal recognition particle subunit FFH/SRP54 (srp54) 
Protein accessionYP_560469 
Protein GI91785263 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0541] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00959] signal recognition particle protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACA ATCTGACTCA ACGGATGGCG CGCGTCGTCA AGACGCTGCG CGGCGAAGCC 
CGGCTTACCG AGGCGAACAC CCAGGAAATG CTGCGCGAAG TGCGTCTCGC ACTGCTCGAG
GCCGACGTGG CGCTGCCCGT CGTGCGCGAG TTCATCGCCA AGGTCAAGGA AAAGGCGCTC
GGCGAGGAAG TCATCAGCAG CCTCTCGCCG GGCCAGGCGC TGGTCGGCGT GGTGCAGCGC
GAGCTGACCG CGATCATCGG CGGCGACTAC GAAGGCAAGG CGGTCGAACT CAACCTCGCC
GTCACGCCGC CGGCCGTCAT CCTGATGGCG GGCCTGCAGG GCGCGGGTAA AACGACCACG
GTCGGCAAGC TCGCCAAGCT GCTGCGTGAG AAGTACAAGA AGAAAGTACT GACCGTGTCG
TGCGACGTCT ACCGCCCCGC CGCTATCGCG CAGTTGAAGA CGGTGACCGA GCAGGTCGGT
GCGGATTTCT TCCCGTCGGA ACCGGACCAG AAGCCGGTGG ACATCGCGCG CGCCGCCGTG
GATTGGGCCA GGCGCCACTA TCACGACGTG CTGCTGGTCG ACACGGCCGG CCGTCTCGGT
ATCGACGAAG CGATGATGAA GGAAATCACC GCGCTGCACG CCGAGCTGAA ACCGGCGGAA
ACGCTGTTCG TGGTCGACGC GATGCTCGGC CAGGACGCGG TGAACACCGC CAAGGCCTTT
AGCGACGCGC TGCCGCTCAC CGGCGTGGTC CTCACCAAGC TCGACGGCGA CTCGCGCGGC
GGTGCGGCGC TCTCCGTGCG CCATGTCACG GGCAAGCCGA TCAAGTTCGT CGGCGTCGCG
GAAAAGCTCG ACGGCCTCGA AGTCTTCCAC CCGGATCGCA TGGCGAACCG GATTCTCGGC
ATGGGCGACA TTCTTGCCCT CGTCGAAGAA GCGCAACGCG GTGTGGACGT TCAGGCTGCG
CAGAAGCTCG CCGACAAGGT CAAGAAAGGC GGCGACTTCG ATCTGAACGA TTTCCGCGCC
CAGCTGACGC AAATGAAGGG CATGGGCGGC CTGTCGTCGC TGATGGACAA ATTGCCCGCG
CAATTTCAGC AGGCCGCCGC CGGCGCCGAC ATGGGCCAGG CCGAAAAGCA GATGCGCCGC
ATGGAAGGCA TCATCAATTC CATGACGCCG CTGGAACGCG CCAAGCCCGA CCTGATCAAG
GCCACGCGCA AGCGCCGCAT CGCCGCGGGT GCGGGCGTGC AGGTCCAGGA AGTCAACCGC
ATGCTGAATC AGTACGACCA GATGCGCACC ATGATGAAAA AGCTCAAGGG CGGCAACCTG
CAGAAGATGA TGCGCGGCAT GAAGGGCATG TTGCCCGGCA TGCGCTAA
 
Protein sequence
MLDNLTQRMA RVVKTLRGEA RLTEANTQEM LREVRLALLE ADVALPVVRE FIAKVKEKAL 
GEEVISSLSP GQALVGVVQR ELTAIIGGDY EGKAVELNLA VTPPAVILMA GLQGAGKTTT
VGKLAKLLRE KYKKKVLTVS CDVYRPAAIA QLKTVTEQVG ADFFPSEPDQ KPVDIARAAV
DWARRHYHDV LLVDTAGRLG IDEAMMKEIT ALHAELKPAE TLFVVDAMLG QDAVNTAKAF
SDALPLTGVV LTKLDGDSRG GAALSVRHVT GKPIKFVGVA EKLDGLEVFH PDRMANRILG
MGDILALVEE AQRGVDVQAA QKLADKVKKG GDFDLNDFRA QLTQMKGMGG LSSLMDKLPA
QFQQAAAGAD MGQAEKQMRR MEGIINSMTP LERAKPDLIK ATRKRRIAAG AGVQVQEVNR
MLNQYDQMRT MMKKLKGGNL QKMMRGMKGM LPGMR