Gene Bxe_A0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A0506 
Symbol 
ID4005905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp4319503 
End bp4320495 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content63% 
IMG OID637949124 
Productoctylprenyl-diphosphate synthase 
Protein accessionYP_560479 
Protein GI91785273 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.282953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.531544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCGA CTGCCACTCC CTCCTCCAAC GCCGCCAGCC TGCTCGCTCC GATCGCCGAA 
GACATGCAGC AGGTCAATCG CGTCATACGG CACCGCCTTG CGTCCGACGT GATGCTGATC
AACCAGATTT CGGAGTACAT CATCAGCGCC GGCGGCAAAC GCCTGCGGCC CGCGCTGCTG
TTGCTGGTGG CCGGCGCGCT GGGTGAAACC ACGGGGCACC GGCACGAACT GGCGGCGGTC
GTCGAATTCA TCCATACGGC CACGCTGCTG CACGACGACG TGGTCGACGA ATCCGACCTG
CGGCGCGGCC GGCAGACGGC CAATGCGCTG TTCGGCAACG CCGCGAGCGT GCTGGTGGGC
GACTTCCTGT ACTCGCGCTC GTTCCAGATG ATGGTCGGCG TGGGCAAGAT GCGCGTCATG
GAAATTCTGT CGGAGGCGAC CAACATCATC TCCGAAGGCG AAGTGCTGCA ACTCCTCAAC
ATGCACGACG CCGACGTGGA CGAAGCCCGC TACATGCAGG TGATTCGCTA CAAGACCGCC
AAGCTGTTCG AGGCCGCGGC CCAACTCGGC GCGGTGCTGG CCGGTTCGGA CGCGAAAACC
GAAGCGGCGG CGGCGGAATT CGGCCGGCGC ATCGGCACCG CTTTCCAGAT CATGGACGAC
TGGCTCGACT ACACGGGCAC GGCCGAGTCG ATGGGAAAAA ATGCCGGCGA CGACCTTCGC
GAAGGCAAGC CAACGCTCCC GCTGATCTAT CTGATCGAAC GCGGCACGCC GGAGCAATCG
GCGCTGGCGC GCGAAGCGAT CGAGCAAGGC GGCACGGATC GTTTCGACAC CATTTTCGAG
GCAATCACGC GTTCCGGCGC GCTGGATCAC ACGCTCGAAT GCGCGAAACA GGAAGCCCAG
GCGGCCGCGG CAGCAATTTC TTCGTTTCCG GATTCCATTT TCAAAGATAG CCTGCTAGAA
TTATGTTCTT ACTCGACGGC AAGACAGTCT TGA
 
Protein sequence
MSSTATPSSN AASLLAPIAE DMQQVNRVIR HRLASDVMLI NQISEYIISA GGKRLRPALL 
LLVAGALGET TGHRHELAAV VEFIHTATLL HDDVVDESDL RRGRQTANAL FGNAASVLVG
DFLYSRSFQM MVGVGKMRVM EILSEATNII SEGEVLQLLN MHDADVDEAR YMQVIRYKTA
KLFEAAAQLG AVLAGSDAKT EAAAAEFGRR IGTAFQIMDD WLDYTGTAES MGKNAGDDLR
EGKPTLPLIY LIERGTPEQS ALAREAIEQG GTDRFDTIFE AITRSGALDH TLECAKQEAQ
AAAAAISSFP DSIFKDSLLE LCSYSTARQS