Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A0488 |
Symbol | ddl |
ID | 4005924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 4339492 |
End bp | 4340433 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637949143 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_560497 |
Protein GI | 91785291 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0391876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGTA TCGACCCCAA ACAGTTCGGC AAGGTGGCAG TGCTGCTCGG CGGTAATTCC GCCGAGCGCG AGGTGTCGCT CAATTCCGGG CGTCTCGTGC TTCAAGGTCT GCGCGACGCC GGCATCGACG CGCATCCGTT CGATCCGGCC GAGCGTCCGC TCGCCGCATT GAAGGAAGAG GGCTTCGTGC GCGCGTTCAA CGCGCTGCAC GGCGGCTACG GCGAGAACGG CCAGATCCAG GGCGCGCTCG ATTTTTACGG CATCCGCTAC ACGGGCAGCG GCGTGCTCGG CTCGGCGCTC GGTCTGGACA AGTTCCGCAC CAAGCTCGTG TGGCAGCAAC TCGGTATTCC GACGCCGCCG TTCGAAGCCG TGCTGCGCGG CGACGACTAC GAAGCGCGCG CCAAGGAGAT CGTCGCGAAG CTCGGTTTGC CGCTTTTCGT GAAGCCGGCG AGCGAAGGTT CGAGCGTCGC GGTAATCAAG GTGAAAAGCG CAGACGCGCT GCCCGCCGCG TTGATCGAAG CAGTGAAGTT CGACAGGATC GTGGTGGTCG AAAAGAGTAT TGAAGGCGGC GGCGAATACA CCGCGTGCAT CGCCGGCAAT CTGGATTTGC CGGTGATCCG CATCGTGCCG GCCGGCGAGT TTTACGATTA CCACGCGAAG TACATCGCGA ACGACACGCA GTATCTGATT CCGTGCGGTC TGACGGCGGA CGAGGAGGCG CGTCTGAAAG TGCTGGCGCG CCGTGCCTTC GACGTGCTCG GCTGCACCGA CTGGGGCCGC GCGGATTTCA TGCTCGACGC CGACGGCAAC CCGTATTTCC TCGAAGTGAA CACGGCGCCC GGCATGACCG ATCACTCGCT GCCGCCGAAA GCGGCGAGAG CGGTGGGCAT CAGTTATCAG GAACTCGTTG TCGCCGTGTT GGCGCTGACG CTCAAGGACT AA
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Protein sequence | MSSIDPKQFG KVAVLLGGNS AEREVSLNSG RLVLQGLRDA GIDAHPFDPA ERPLAALKEE GFVRAFNALH GGYGENGQIQ GALDFYGIRY TGSGVLGSAL GLDKFRTKLV WQQLGIPTPP FEAVLRGDDY EARAKEIVAK LGLPLFVKPA SEGSSVAVIK VKSADALPAA LIEAVKFDRI VVVEKSIEGG GEYTACIAGN LDLPVIRIVP AGEFYDYHAK YIANDTQYLI PCGLTADEEA RLKVLARRAF DVLGCTDWGR ADFMLDADGN PYFLEVNTAP GMTDHSLPPK AARAVGISYQ ELVVAVLALT LKD
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