Gene Bxe_A0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A0488 
Symbolddl 
ID4005924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp4339492 
End bp4340433 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content64% 
IMG OID637949143 
ProductD-alanine--D-alanine ligase 
Protein accessionYP_560497 
Protein GI91785291 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID[TIGR01205] D-alanine--D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0391876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTA TCGACCCCAA ACAGTTCGGC AAGGTGGCAG TGCTGCTCGG CGGTAATTCC 
GCCGAGCGCG AGGTGTCGCT CAATTCCGGG CGTCTCGTGC TTCAAGGTCT GCGCGACGCC
GGCATCGACG CGCATCCGTT CGATCCGGCC GAGCGTCCGC TCGCCGCATT GAAGGAAGAG
GGCTTCGTGC GCGCGTTCAA CGCGCTGCAC GGCGGCTACG GCGAGAACGG CCAGATCCAG
GGCGCGCTCG ATTTTTACGG CATCCGCTAC ACGGGCAGCG GCGTGCTCGG CTCGGCGCTC
GGTCTGGACA AGTTCCGCAC CAAGCTCGTG TGGCAGCAAC TCGGTATTCC GACGCCGCCG
TTCGAAGCCG TGCTGCGCGG CGACGACTAC GAAGCGCGCG CCAAGGAGAT CGTCGCGAAG
CTCGGTTTGC CGCTTTTCGT GAAGCCGGCG AGCGAAGGTT CGAGCGTCGC GGTAATCAAG
GTGAAAAGCG CAGACGCGCT GCCCGCCGCG TTGATCGAAG CAGTGAAGTT CGACAGGATC
GTGGTGGTCG AAAAGAGTAT TGAAGGCGGC GGCGAATACA CCGCGTGCAT CGCCGGCAAT
CTGGATTTGC CGGTGATCCG CATCGTGCCG GCCGGCGAGT TTTACGATTA CCACGCGAAG
TACATCGCGA ACGACACGCA GTATCTGATT CCGTGCGGTC TGACGGCGGA CGAGGAGGCG
CGTCTGAAAG TGCTGGCGCG CCGTGCCTTC GACGTGCTCG GCTGCACCGA CTGGGGCCGC
GCGGATTTCA TGCTCGACGC CGACGGCAAC CCGTATTTCC TCGAAGTGAA CACGGCGCCC
GGCATGACCG ATCACTCGCT GCCGCCGAAA GCGGCGAGAG CGGTGGGCAT CAGTTATCAG
GAACTCGTTG TCGCCGTGTT GGCGCTGACG CTCAAGGACT AA
 
Protein sequence
MSSIDPKQFG KVAVLLGGNS AEREVSLNSG RLVLQGLRDA GIDAHPFDPA ERPLAALKEE 
GFVRAFNALH GGYGENGQIQ GALDFYGIRY TGSGVLGSAL GLDKFRTKLV WQQLGIPTPP
FEAVLRGDDY EARAKEIVAK LGLPLFVKPA SEGSSVAVIK VKSADALPAA LIEAVKFDRI
VVVEKSIEGG GEYTACIAGN LDLPVIRIVP AGEFYDYHAK YIANDTQYLI PCGLTADEEA
RLKVLARRAF DVLGCTDWGR ADFMLDADGN PYFLEVNTAP GMTDHSLPPK AARAVGISYQ
ELVVAVLALT LKD