| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0469 |
|---|
| Symbol | |
|---|
| ID | 4005948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 4370291 |
|---|
| End bp | 4371493 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637949167 |
|---|
| Product | beta-ketoadipyl CoA thiolase |
|---|
| Protein accession | YP_560516 |
|---|
| Protein GI | 91785310 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACG CCTTCATTTG CGATGCGATT CGCACCCCAA TCGGCCGCTA CGGCGGCGCC
CTGAAGGATG TCCGCGCCGA CGACCTCGGC GCGGTGCCGA TCAGGGCGTT GATCGACCGC
AATCCCGGCG TCGACTGGCG CGCCCTCGAC GACGTGATCT ACGGCTGCGC CAACCAGGCG
GGCGAAGACA ACCGCAACGT TGCGCGCATG TCGGCATTGC TGGCCGGCTT GCCCACTGAG
GCACCGGGCG CCACCATCAA CCGCCTGTGC GGCTCGGGTA TGGACGCGGT CGGCACCGCG
GCGCGCGCCA TCAAGGCGGG CGAAGCGCGT CTGATGATCG CCGGCGGCGT CGAAAGCATG
ACACGTGCGC CGTTCGTCAT GGGCAAGGCG ACTGGCGCGT TCTCCCGCCA GGCTGAGATC
TACGACACGA CCATTGGCTG GCGCTTCATC AATCCGCTGA TGAAACGCCA GTACGGCGTC
GATTCGATGC CTGAAACCGC GGAAAACGTC GCCGTTGAAT TCAGCGTGAG CCGCGCGGAT
CAAGACATGT TCGCGCTGGC AAGCCAGCAA AAGGCGGCTC GCGCACAACA GGACGGAACG
CTGGCCCAGG AAATTGTCGG CGTCGAAATC GCGCAAAAGA AAGGCGACCC AGTGCGCGTG
CTGCTCGACG AACACCCGCG TGAAACGTCG CTCGAAAGCC TGGGCAAGCT CAAAGGCGTG
GTTCGCCCCG ACGGCAGCGT GACAGCCGGC AACGCGTCCG GTGTGAACGA CGGTGCCTGC
GCGCTGTTGC TCGCGAACCA GCAGGCCGCC GACCAGTACG GCCTGCGCCG CCGCGCCCGC
GTGGTGGGCA TGGCGACCGC GGGCGTCGGG CCGCGCATCA TGGGGATCGG TCCGGCGCCG
GCTACGCAAA AGCTGCTGAA GCAGCTCGGC ATGACGCTCG AACAATTCGA CGTGATCGAG
TTGAACGAAG CGTTCGCATC GCAAGGCCTG GCAGTTCTGC GTACGCTCGG CTTGCGCGAC
GACGACCCGC GCGTCAATCC GAACGGCGGA GCCATCGCGC TCGGCCACCC GCTGGGCGCA
TCGGGTGCGC GTCTGATCAC GACCGCGCTG TACCAGCTGG AACGGATCAA CGGCCGCTTT
GCGCTTTGCA CGATGTGCAT CGGCGTAGGC CAGGGCATCG CGCTGGTCAT CGAGCGGCTC
TGA
|
|---|
| Protein sequence | MNDAFICDAI RTPIGRYGGA LKDVRADDLG AVPIRALIDR NPGVDWRALD DVIYGCANQA
GEDNRNVARM SALLAGLPTE APGATINRLC GSGMDAVGTA ARAIKAGEAR LMIAGGVESM
TRAPFVMGKA TGAFSRQAEI YDTTIGWRFI NPLMKRQYGV DSMPETAENV AVEFSVSRAD
QDMFALASQQ KAARAQQDGT LAQEIVGVEI AQKKGDPVRV LLDEHPRETS LESLGKLKGV
VRPDGSVTAG NASGVNDGAC ALLLANQQAA DQYGLRRRAR VVGMATAGVG PRIMGIGPAP
ATQKLLKQLG MTLEQFDVIE LNEAFASQGL AVLRTLGLRD DDPRVNPNGG AIALGHPLGA
SGARLITTAL YQLERINGRF ALCTMCIGVG QGIALVIERL
|
|---|
| |