Gene Bxe_A0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A0332 
SymbolrpmD 
ID4006086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp4505550 
End bp4505732 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content57% 
IMG OID637949305 
Product50S ribosomal protein L30 
Protein accessionYP_560653 
Protein GI91785447 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.00936849 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00323406 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTGATA AAACTGTCAA GGTCCAGCTC GTCAAGAGCC TGATCGGCAC CCGTGAAACG 
CACCGTGCGA CGGTGCGTGG CTTGGGTCTG CGCCGACTCA ACTCGGTTAG CGAGTTGCAG
GACACGCCGG CCGTGCGCGG CATGATCAAC AAGGTTTCGT ACCTCGTTAA GGTCATCAGC
TAA
 
Protein sequence
MSDKTVKVQL VKSLIGTRET HRATVRGLGL RRLNSVSELQ DTPAVRGMIN KVSYLVKVIS