Gene Bxe_A0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A0328 
SymbolrpsH 
ID4006090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp4507203 
End bp4507598 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content56% 
IMG OID637949309 
Product30S ribosomal protein S8 
Protein accessionYP_560657 
Protein GI91785451 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value3.54136e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00289436 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCATGA GTGATCCTAT CGCCGATATG CTGACTCGCA TCCGCAATGC GCAGATGGTT 
GAGAAAGTCT CGGTGACTAT GCCCTCGTCG AAAGTCAAGG TTGCGATTGC GCAGGTCCTG
AAGGACGAAG GTTATATCGA TGATTTCGCA GTGAAGTCCG AAGGTGCGAA GTCTGAATTG
AACATCGTGT TGAAGTACTA CGCTGGCCGT CCGGTTATCG AACGCATTGA ACGCGTCTCG
AAGCCTGGTC TGCGTGTGTA CCGCGGCCGT AACGACATCC CCGTGGTCAT GAATGGCCTC
GGCGTGGCAA TCGTGTCGAC GCCGAAGGGC GTGATGACGG ACCGCAAGGC GCGTGCAACG
GGCGTTGGCG GCGAAGTCAT CTGCTACGTC GCTTAA
 
Protein sequence
MSMSDPIADM LTRIRNAQMV EKVSVTMPSS KVKVAIAQVL KDEGYIDDFA VKSEGAKSEL 
NIVLKYYAGR PVIERIERVS KPGLRVYRGR NDIPVVMNGL GVAIVSTPKG VMTDRKARAT
GVGGEVICYV A