Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A0314 |
Symbol | rplC |
ID | 4006104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 4513558 |
End bp | 4514217 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637949323 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_560671 |
Protein GI | 91785465 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000138197 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00855725 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCTTG GACTCGTAGG TCGCAAGGTT GGCATGACCC GTATCTTCAC GGCAGAAGGG GATTCGATTC CCGTTACCGT GCTGGACGTG TCCGACAACC GCGTGACGCA GATCAAGACT GTTGAAACCG ACGGCTACAC GGCCGTACAG GTTGCATTCG GTACGCGCCG TGCATCGCGT GTGACGAAGC CGTTGGCCGG TCATCTCGCC AAAGCCGGTG TTCAAGCCGG TGAAATCCTC AAAGAATTCC AGATTGATGC TGCCAAGGCT GCCGAGTTGT CGAACGGCAC CGTGGTCGGT CCCGACCTGT TCGAAGTAGG CCAGAAGGTC GACGTGCAAG GCGTGTCGAT CGGTAAGGGC TACGCCGGTA CCATCAAGCG TTACAACTTC GCATCCGGCC GTGCATCGCA CGGTAACTCG CGCTCGCACA ACGTGCCGGG TTCGATCGGT ATGGCGCAGG ATCCGGGTCG TGTTTTCCCG GGTAAGCGCA TGACCGGTCA CATGGGTGAC GACACGGTAA CGGTGCAAAA CCTCGAAATC GCTCGTATCG ACGCTGACCG CAAGCTGTTG CTGGTCAAGG GCGCCGTTCC GGGTGCGAAG GGTGGCAAGG TATTCGTTAC GCCGGCCGTG AAGACGCGTG CCGTGAAAGG AGCGAAATAA
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Protein sequence | MSLGLVGRKV GMTRIFTAEG DSIPVTVLDV SDNRVTQIKT VETDGYTAVQ VAFGTRRASR VTKPLAGHLA KAGVQAGEIL KEFQIDAAKA AELSNGTVVG PDLFEVGQKV DVQGVSIGKG YAGTIKRYNF ASGRASHGNS RSHNVPGSIG MAQDPGRVFP GKRMTGHMGD DTVTVQNLEI ARIDADRKLL LVKGAVPGAK GGKVFVTPAV KTRAVKGAK
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