| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0222 |
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| Symbol | |
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| ID | 4006205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 4611434 |
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| End bp | 4614520 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637949423 |
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| Product | Type I site-specific deoxyribonuclease HsdR |
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| Protein accession | YP_560762 |
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| Protein GI | 91785556 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAG ACCAACTCGA ACAGGAAACG CTGGACTGGT TGGCCGACGT TGGCTACCGC
TGCCTCTTCG GCCCCGACCT CGCGCCGGAT GGTGCCAACC CCGAGCGGGC CGACTACCGC
CACGTGCTAT TGGTCGAACG GCTGCGCGGC GCGGTTGCAC GGCTTAACCC CGGCATCCCG
CCTGCGACGC GGGAGGATGC GTTGCAGCAG GTGCGGGACC TGGGCATTCC GGCGCTCCTG
TCGGCCAACC GGCACTTTCA CCAGTTGCTG GTCGGCGGGG TGCCGGTCGA GTACCAGAAG
GACGGCGAGT TGCGCGGTGA CTTCGTGCGC CTCGTCGACT GGGCCGACCC GGCGGCCAAC
GAGTGGCTGG CGGTCAACCA GTTCGCCATC AAGGGCCCGC AGCATGCACG GCGTCCCGAC
GTGATGCTGT TCGTCAATGG CGTGCCGCTG GTACTGCTGG AGCTGAAGAA CCCCGCCGAC
CAGAACGCCG ACATCTGGAA GGCTTATGAC CAAATACAGA CCTACAAGGC GCAGATTCCG
GACGTCTTCC AGTACAACGA AGTCCTGGTG ATTTCGGATG GGTCGCAGGC GCGCATGGGT
TCGCTGTCAG CCGATGCGGA GCGCTTCATG CAGTGGCGCA CCATCGACGG CGCCACGCTT
GACCCGCTTG GTCAGTTTAA CGAACTGGAA ACATTGATTC GCGGCGTGCT TGCGCCGACT
TACCTGCTCG ACTACCTACG CTTCTTCGTG CTGTTCGAGG ATGACGGCAC ATTGGTCAAG
AAGATTGCCG GCTACCATCA GTTCCACGCG GTGTGCGCGG CTATCCAACA GGTGGTGACG
GCATCGCGCC CGGGTGCCAG CCACAAGGGT GGAGTGGTCT GGCACACACA GGGCAGCGGC
AAGAGCATCA CCATGACCTG CTTCGCAGCC CGCGTTATGC AGGAAGCGGC GATGGAAAAC
CCGACCATAG TCGTCATCAC CGACCGAAAC GACCTTGACG GACAACTGTT CGGCGTTTTT
TCGCTGGCAC AGGACCTGTT GCGCGAGCAG CCTGTGCAGG CCGGCACCCG CCAGGATTTG
CGCGCGAAGC TCGCTAACCG GCCCTCCGGC GGCATAGTGT TTGCCACCAT CCAGAAGTTC
ATGCCCGGCG AGGACGAAGA CACGTACCCG GTGCTTTCGG ACCGAAACAA CATCGTGGTC
ATCGCCGATG AGGCGCACCG CACCCAGTAT GGCTTCGAGG CACAACTGAG GGGCAAACCG
GGCCAGGAAA AGTATCAGGT CGGCTATGCG CAGCACCTGC GCGACGCACT CCCCAATGCC
ACCTTCGTAG CCTTTACCGG CACGCCGGTA TCGAGCGAGG ACCGTGACAC GCGCGCCGTA
TTCGGGGAGT ACATCCACGT CTACGACATG CAGCAGGCCA AAGAGGACGG CGCCACGGTC
GCCATTTATT TCGAGTCGCG CCTGGCCAAG CTGTCGCTCA AGGCCGAGGA CCTGCCGCAT
ATCGACGCCG AAGTGGACGA ACTGGCCGAG GACGAAGAGG AAAGCCAGCA GGCCAAACTC
AAGAGCCGCT GGGCCGCGCT AGAAAAGGTA GTCGGCGCGG AACCACGCGT GGCAGCCGTG
GCAGCCGACC TCGTCGCACA CTTCGAGGAA CGCAACAAGG CACAGAACGG CAAGGCCATG
GTGGTGGCGA TGAGCCGCGA GATTTGCGTT CACCTTTACG ACGAAATCAT CAAGCTTCGC
CCCGACTGGC ACGACCCGGA CCCGGAGAAA GGCGCCGTCA AAATCGTCAT GACCGGCTCG
GCCAGCGACA AGGCGCTGCT GCGACCGCAT ATATACAGCG GCCAGGTCAA GAAGCGGCTC
GAAAAGCGCT TTAAGGACCC GGCCGACCCA CTGCGCATGG TCATCGTCCG CGACATGTGG
CTTACGGGCT TCGACGCGCC ATGTGTACAC ACGTTGTACG TGGACAAGCC CATGAAAGGC
CACAACCTGA TGCAGGCGAT TGCTCGGGTG AACCGCGTCT TCAAGGACAA GCAGGGTGGA
CTGGTCGTTG ACTACATCGG AATCGCCAAC GAATTGAAGA GCGCGTTGAA GGAATACACG
GCCAGCAATG GACGTGGACG TCCAACGGTC GACGCCGCCG AAGCGTATTC CGTGCTCGAG
GAAAAGCTCG ATGTGCTGCG CGGCATGCTT CATGGCTACG ACTACAGCGG TTTTCTGACC
GGCGGCCACA AATGCCTCGC CGGCGCGGCC AACCACGTAT TGGGATTGAA GGACGGCAAG
AAGCGTTTTG CGGATACGGC GCTCGCCATG AGCAAGGCCT TTACGCTGTG CTGCACGCTC
GATGAGGCCA AGCTCGTGCG CGAGGAAGTG GCCTTCATGC AGGCCGTGAA GGTCATTCTC
ACCAAGCGCG AACTGAGCGA CAAGAAGAAG ACCAACGAGG AGCGTGAACT CGCCATCCGG
CAAATCATCA GCTCGGCAGT TGTGTCCGAG AAAGTGGTGG ATGTCTTCGA GGCGGTCGGG
CTCGAAAAGC CGAACATCGG TATTCTCGAC GAAGCCTTCC TCGCGGAAGT CCGGAATCTG
CCCGAACGCA ACCTTGCTGT GGAACTGCTA GAGCGGCTTC TTGAAGGCGA AATCAAAAGC
CGTTTCGCAA GCAATGTAGT GCAGGAAAAG AAGTTCTCTG AGATGCTCGC CAACGTCGTG
ACGCGTTACC AGAACCGGGC GATTGAAACA GCCCAGGTCA TTGAAGAGCT CATCGATATG
GCCAAGAAGT TCCGCGCAGC CGCGACCCGC GGCGAGGAGC TGGGCTTGAC GGAAGATGAA
ATCCGTTTTT ACGACGCGCT CGCCAATAAC GAGTCAGCCG TCCGCGAGCT GACCGACGAG
ACGCTCAAGA AGATTGCACA CGAACTCACC GAAAACCTGC GTCAGAACAT CACAGTGGAC
TGGTCGGAGC GGGAGAGCGT GCGAGCCAGA CTGCGGCTGA TGGTCAAGCG TATCCTCCGT
AAATACAAGT ACCCGCCGGA CCAACAGGAC GGCGCGGTGG AGCTGGTTTT GCAGCAGGCA
CAGGCGCTCG GGGAGGCATG GAGCTAG
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| Protein sequence | MTEDQLEQET LDWLADVGYR CLFGPDLAPD GANPERADYR HVLLVERLRG AVARLNPGIP
PATREDALQQ VRDLGIPALL SANRHFHQLL VGGVPVEYQK DGELRGDFVR LVDWADPAAN
EWLAVNQFAI KGPQHARRPD VMLFVNGVPL VLLELKNPAD QNADIWKAYD QIQTYKAQIP
DVFQYNEVLV ISDGSQARMG SLSADAERFM QWRTIDGATL DPLGQFNELE TLIRGVLAPT
YLLDYLRFFV LFEDDGTLVK KIAGYHQFHA VCAAIQQVVT ASRPGASHKG GVVWHTQGSG
KSITMTCFAA RVMQEAAMEN PTIVVITDRN DLDGQLFGVF SLAQDLLREQ PVQAGTRQDL
RAKLANRPSG GIVFATIQKF MPGEDEDTYP VLSDRNNIVV IADEAHRTQY GFEAQLRGKP
GQEKYQVGYA QHLRDALPNA TFVAFTGTPV SSEDRDTRAV FGEYIHVYDM QQAKEDGATV
AIYFESRLAK LSLKAEDLPH IDAEVDELAE DEEESQQAKL KSRWAALEKV VGAEPRVAAV
AADLVAHFEE RNKAQNGKAM VVAMSREICV HLYDEIIKLR PDWHDPDPEK GAVKIVMTGS
ASDKALLRPH IYSGQVKKRL EKRFKDPADP LRMVIVRDMW LTGFDAPCVH TLYVDKPMKG
HNLMQAIARV NRVFKDKQGG LVVDYIGIAN ELKSALKEYT ASNGRGRPTV DAAEAYSVLE
EKLDVLRGML HGYDYSGFLT GGHKCLAGAA NHVLGLKDGK KRFADTALAM SKAFTLCCTL
DEAKLVREEV AFMQAVKVIL TKRELSDKKK TNEERELAIR QIISSAVVSE KVVDVFEAVG
LEKPNIGILD EAFLAEVRNL PERNLAVELL ERLLEGEIKS RFASNVVQEK KFSEMLANVV
TRYQNRAIET AQVIEELIDM AKKFRAAATR GEELGLTEDE IRFYDALANN ESAVRELTDE
TLKKIAHELT ENLRQNITVD WSERESVRAR LRLMVKRILR KYKYPPDQQD GAVELVLQQA
QALGEAWS
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