| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0054 |
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| Symbol | |
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| ID | 4006373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 4781846 |
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| End bp | 4784782 |
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| Gene Length | 2937 bp |
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| Protein Length | 978 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637949587 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_560925 |
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| Protein GI | 91785719 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCG AACACCCGGA TCGTCTGATG AACCGCACTC CTCTCTCGCT CGCCGCGCTC
GAAGTGCATG ACGCCTTCGC CGAACGGCAC ATCGGCCCGG ATTCGGCCGA CCAGCAAGCG
ATGCTCGAAG CCCTCGGCTT CGCGTCGCGC GCCGCGCTGA TCGACGCCGT CATTCCGAAG
ACGATCCGCC GCACCGAACC GCTGCCGCTC GGCCCCTTCG CGCAACCGAA AAGCGAAGCC
GAAGCGCTCG CCACGCTGCG CGAGCTCGCG GACAGGAACC AGGTGTTCCG CTCGTACATC
GGCCAGGGCT ATTACAACGC GCACACGCCG ACGGTGATCC TGCGTAACGT GCTGGAAAAT
CCGGCGTGGT ACACCGCGTA CACGCCGTAC CAGCCAGAAA TTTCGCAAGG CCGTCTGGAA
GCGCTACTGA ACTTCCAGCA GATGATCGTC GACCTGACGG GTCTGGCGAT CTCGAATGCG
TCGCTGCTCG ACGAAGCCAC GGCCGCGGCC GAGGCGATGA CGCTGCTGCA ACGCATCGGC
AAGCCGAAGT CGAACGTGTT CTATGTGGCC GACGACGTGC TGCCGCAAAC CATCGAAGTG
GTGAAGACGC GCGCCACGCC GGTGGGCATT GAAGTGAAAG TGGGCCCGGC TGCGGACGCG
GCGAACGCGA ACGCGTTCGG CGTACTGCTG CAATACCCGG GCGTGAACGG CGACGTGCGC
GACTACCGCG CCCTGGCCGA AGCGATCCAC GCCGCGGGCG GCCACGTGGT GGTCGCCGCC
GACCTGCTCG CGCTGACCGT CCTCACGCCG CCGGGCGAAT GGGGCGCGGA CGTGGCCGTC
GGCAACACGC AGCGCTTCGG CGTGCCGGTC GGCTTCGGCG GCCCGCATGC GGCTTACCTC
GCCGTGCGCG ACGAATTCAA GCGCCAGATG CCGGGCCGCC TCGTCGGCGT GACCGTCGAC
GCGCAAGGCA ACCCCGCGCT GCGTCTCGCG CTGCAAACGC GCGAACAGCA TATCCGCCGC
GAGAAGGCCA CCTCGAACGT ATGTACCGCG CAAGCATTGC TCGCGATCAT GGCCAGCATG
TACGCCGTGT ATCACGGCCC GCACGGCCTG AAAACGATCG CGCTGCGCGT GAACCGGATC
GCCGCGCTGC TGGCAGAAGG TGCGAAGCAA CTCGGCTACA CGCTCGTCAA CGAAACGTTC
TTCGACACGC TCACATTCGA AACCGGCGCG CGCACGCAAG CGCTGCATGA CGCCGCGCTT
GCGAAGCGCA TCAACCTGCG CCGCGTGAGC GACACGCAAG TGGGCCTGTC GGTCGACGAA
ACCACCACGC GCCGCGATCT GGCCGATCTG CTCGAAGTGT TCGCACAAGC CGCGGGCGCC
AAAATCGTGC CGCAAGTGGA CGCGCTCGAC TCGACCATCG CCGCATCGGA TACGGCATCG
GTGCCGCCCG CGCTCGAGCG CACCAGCGCG TATCTCACGC ACCACGTATT CAACCGCCAT
CATTCGGAAA CGGAAATGCT GCGCTATCTG CGCAGCCTGT CGGACAAAGA CCTCGCGCTC
GACCGCTCGA TGATCCCGCT CGGCTCGTGC ACGATGAAGC TGAACGCGAC CTCGGAAATG
CTGCCGGTCA CGTGGCCTGA ATTCGGCCAG ATCCATCCGT TCGCGCCGGC CGAGCAAACC
GTCGGCTATC GCGAAATGAT CGATCAGCTC GAAGCGATGC TGGTCGCGGC CACCGGCTAC
GCTGCCGTGT CGCTGCAACC GAATGCCGGC TCGCAAGGCG AGTACGCGGG CCTGTTGATC
ATTCACGCGT ATCACGCGTC GCGTGGCGAA GCGCATCGCA ATGTCTGCCT GATTCCCGCT
TCGGCGCACG GCACGAACCC GGCCTCGGCA CACATGGCCG GCATGCAGGT GATCGTGGTG
GCGTGCGACG CGCAAGGCAA CGTCGATATC GAAGACCTGA AGAAAAAGGC CGAACAGCAC
GCCGACAAAC TCGCGGCGAT CATGATCACG TATCCTTCCA CGCACGGCGT GTTCGAGCAG
AACGTGCGCG AAATCTGCGA GATCGTGCAT GCGCACGGCG GTCAGGTCTA CGTGGACGGC
GCGAACATGA ACGCGATGGT CGGCCTCACT GCGCCGGGCC AGTTCGGCGG CGACGTGTCG
CACCTGAATC TGCACAAGAC GTTCTGCATT CCGCACGGCG GCGGCGGACC GGGCGTCGGT
CCGGTCGCGG TCGGCGCGCA TCTCGCGCAG TTCCTGCCGA ATCAGATCTC GTCGGGCTAC
GAACGCGCGC CGAACGGTAT CGGCGCCGTG TCGGGCGCAC CGTACGGCTC GGCGTCTATC
CTGCCGATCT CGTGGATGTA TATCGCGATG ATGGGCGCGA AGAACCTCAC CGCCGCGACC
GAAACCGCGA TCCTCAACGC GAACTACGTC GCGAAGAAAC TCGCGCCGCA CTATCCGGTG
CTGTATTCGG GCCCGGGCGG ACTGGTCGCG CACGAGTGCA TTCTCGACCT GCGCCCGATC
AAGGAAACCA GCGGCATTAC CGTCGACGAC GTCGCCAAGC GTCTCGCCGA CTACGGCTTC
CATGCGCCGA CCATGAGCTT CCCGGTGCCG GGCACGCTGA TGGTCGAGCC GACCGAATCG
GAATCGAAGG AAGAACTCGA CCGTTTCATC GAAGCGATGA TCGCGATCCG CGAGGAAATC
CGCGCAGTCG AAGAAGGCCG CTCGGACCGC GAGGACAATC CGCTGAAGCA TGCACCGCAT
ACGGCGGCGG TGGTCATCGC GAATGACTGG AAGCATGCGT ATGCGCGCGA AACCGCGGCG
TATCCGCTGC CCACGCTGAT CGCGAAAAAA TACTGGCCGC CGGTCGGCCG CGCGGACAAC
GTGTACGGCG ACCGCAATCT GTTCTGCTCC TGCGTGCCGA TCGCCGATTA CGAGTAA
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| Protein sequence | MKLEHPDRLM NRTPLSLAAL EVHDAFAERH IGPDSADQQA MLEALGFASR AALIDAVIPK
TIRRTEPLPL GPFAQPKSEA EALATLRELA DRNQVFRSYI GQGYYNAHTP TVILRNVLEN
PAWYTAYTPY QPEISQGRLE ALLNFQQMIV DLTGLAISNA SLLDEATAAA EAMTLLQRIG
KPKSNVFYVA DDVLPQTIEV VKTRATPVGI EVKVGPAADA ANANAFGVLL QYPGVNGDVR
DYRALAEAIH AAGGHVVVAA DLLALTVLTP PGEWGADVAV GNTQRFGVPV GFGGPHAAYL
AVRDEFKRQM PGRLVGVTVD AQGNPALRLA LQTREQHIRR EKATSNVCTA QALLAIMASM
YAVYHGPHGL KTIALRVNRI AALLAEGAKQ LGYTLVNETF FDTLTFETGA RTQALHDAAL
AKRINLRRVS DTQVGLSVDE TTTRRDLADL LEVFAQAAGA KIVPQVDALD STIAASDTAS
VPPALERTSA YLTHHVFNRH HSETEMLRYL RSLSDKDLAL DRSMIPLGSC TMKLNATSEM
LPVTWPEFGQ IHPFAPAEQT VGYREMIDQL EAMLVAATGY AAVSLQPNAG SQGEYAGLLI
IHAYHASRGE AHRNVCLIPA SAHGTNPASA HMAGMQVIVV ACDAQGNVDI EDLKKKAEQH
ADKLAAIMIT YPSTHGVFEQ NVREICEIVH AHGGQVYVDG ANMNAMVGLT APGQFGGDVS
HLNLHKTFCI PHGGGGPGVG PVAVGAHLAQ FLPNQISSGY ERAPNGIGAV SGAPYGSASI
LPISWMYIAM MGAKNLTAAT ETAILNANYV AKKLAPHYPV LYSGPGGLVA HECILDLRPI
KETSGITVDD VAKRLADYGF HAPTMSFPVP GTLMVEPTES ESKEELDRFI EAMIAIREEI
RAVEEGRSDR EDNPLKHAPH TAAVVIANDW KHAYARETAA YPLPTLIAKK YWPPVGRADN
VYGDRNLFCS CVPIADYE
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