| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0028 |
|---|
| Symbol | |
|---|
| ID | 4006399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 4815874 |
|---|
| End bp | 4817832 |
|---|
| Gene Length | 1959 bp |
|---|
| Protein Length | 652 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637949613 |
|---|
| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
|---|
| Protein accession | YP_560951 |
|---|
| Protein GI | 91785745 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
|---|
| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTTTC CCACAGAATT TGACGTAATC GTCGTCGGCG GCGGTCATGC CGGCACGGAA
GCCGCGTTGG CTTCAGCTCG CATGGGCAAT ACGACGCTCC TGCTGACCCA CAACATCGAA
ACCCTCGGCC AGATGAGCTG CAATCCGTCG ATTGGCGGCA TTGGCAAAGG CCATCTGGTC
AAGGAAGTCG ACGCGCTCGG CGGCGCAATG GCGGCCGCGA CGGACGAGGG CGGCATCCAG
TTCCGCATCC TGAATTCGTC GAAAGGCCCG GCTGTACGTG CAACGCGCGC TCAGGCTGAC
CGTCTGCTGT ACAAGCAGGC TATCCGGCAC CGGCTCGAAA ATCAGCCAAA CCTGTGGCTG
TTCCAGCAAG CGGTTGACGA TCTGATGGTG GAGGGCGACC GCGTCGTCGG CGCTGTGACG
CAGGTGGGAA TTCGTTTCCG CGGGCGCGCC GTGGTTTTGA CGGCAGGCAC GTTCCTCGAC
GGCAAAATTC ACGTGGGGTT GAACAACTAT ACCGGCGGCC GCGCCGGTGA TCCGGCGGCG
GTTTCGTTGT CGGCGCGTCT GAAGGAATTG AAGTTGCCGC AAGGCCGTCT CAAGACGGGG
ACGCCGCCGC GTATCGATGG CCGCACGATC GATTTTTCGC AACTCGAAGA GCAGCCGGGC
GATCTGGATC CGGTGCCGGT GTTCTCGTTC CTCGGGCGCG TCGAGCAGCA TCCGCGGCAG
GTGCCGTGCT GGGTTACGCA CACGAACGCG CGGACGCACG ACATCATCCG TGGCGGACTG
GACCGTTCGC CTATGTACAC CGGGGTGATC GAGGGGGTGG GGCCACGCTA TTGCCCATCG
ATCGAGGACA AGATTCACCG ATTCGCTTCA AAGGAGTCAC ATCAGATCTT CCTCGAGCCA
GAAGGGCTGA CCACGAACGA GTTCTATCCG AATGGAATCT CCACGAGTCT GCCGTTCGAC
GTTCAACTGG AACTGGTCCG CTCGATGCGA GGTTTGGAGC ATGCGCACAT CCTGAGACCG
GGCTATGCGA TCGAATACGA CTACTTCGAT CCGCGTGGGT TGAAGGCTTC GCTCGAAACC
AAGGTTATCA GTGGGCTCTT TTTTGCCGGC CAGATCAACG GCACGACCGG CTATGAAGAG
GCAGCAGCGC AGGGTCTGCT GGCCGGCATC AACGCGGGCC TGTATGTGCA GGGCAAGGAA
GCATGGTGCC CGCGCCGCGA TCAGGCTTAC CTTGGCGTCT TGGTCGACGA TTTGGTGACG
CGCGGCGTGT CTGAACCGTA TCGGATGTTC ACGAGCCGTG CCGAATATCG TCTGAGTCTG
CGCGAAGACA ATGCGGATAT GCGTCTCACC GAGATTGGCC GTGAGTTGGG TGTGGTCGAC
GACGTTCGCT GGGATGCCTT CAGCCGTAAG CGCGACGCTG TTTCACGTGA AACAGAGCGG
CTTCGCACGA CATGGGTCAA TCCTAAGACG TTATCCGCCG ACGAGGCCAC AGCGCTGCTC
GGCAAGCCAA TCGATCACGA ATATAGTCTG GCGGATCTGC TGCGCCGCCC GGGTGTGTCG
TACGACGGCG TTTGCGCGTT GCGTGCCGGC GCGTGCGCCG CGCCTGAAAC CTTGGCCGAA
GACGACGTGC TGCTCGCGCA GATCAAGGAA CAGATCGAGA TTGGCATCAA ATATCAGGGC
TACATCGACC GCCAGGCGGG TGAAATCGAG CGAAATGAGG CGCACGAAAG TACGCGTCTG
CCCGAAGGGC TGGATTACGC GGAAGTCAGA GGGCTCTCGT TCGAAGCACG GCAAAAATTG
ACGCAGTTTC GCCCCGAAAC CATCGGCCAG GCGTCGCGTA TTTCGGGTAT TACGCCGGCG
GCCATTTCCT TGCTGATGGT CCATCTGAAG CGCGGCTTGG GTCGTCGCCC GACGAAGCCC
GCCGAGTCGG GCACCGACAG CGCGCCGGTG ACGCAATGA
|
|---|
| Protein sequence | MLFPTEFDVI VVGGGHAGTE AALASARMGN TTLLLTHNIE TLGQMSCNPS IGGIGKGHLV
KEVDALGGAM AAATDEGGIQ FRILNSSKGP AVRATRAQAD RLLYKQAIRH RLENQPNLWL
FQQAVDDLMV EGDRVVGAVT QVGIRFRGRA VVLTAGTFLD GKIHVGLNNY TGGRAGDPAA
VSLSARLKEL KLPQGRLKTG TPPRIDGRTI DFSQLEEQPG DLDPVPVFSF LGRVEQHPRQ
VPCWVTHTNA RTHDIIRGGL DRSPMYTGVI EGVGPRYCPS IEDKIHRFAS KESHQIFLEP
EGLTTNEFYP NGISTSLPFD VQLELVRSMR GLEHAHILRP GYAIEYDYFD PRGLKASLET
KVISGLFFAG QINGTTGYEE AAAQGLLAGI NAGLYVQGKE AWCPRRDQAY LGVLVDDLVT
RGVSEPYRMF TSRAEYRLSL REDNADMRLT EIGRELGVVD DVRWDAFSRK RDAVSRETER
LRTTWVNPKT LSADEATALL GKPIDHEYSL ADLLRRPGVS YDGVCALRAG ACAAPETLAE
DDVLLAQIKE QIEIGIKYQG YIDRQAGEIE RNEAHESTRL PEGLDYAEVR GLSFEARQKL
TQFRPETIGQ ASRISGITPA AISLLMVHLK RGLGRRPTKP AESGTDSAPV TQ
|
|---|
| |