| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0023 |
|---|
| Symbol | |
|---|
| ID | 4006404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 4823348 |
|---|
| End bp | 4824514 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637949618 |
|---|
| Product | branched chain amino acid ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_560956 |
|---|
| Protein GI | 91785750 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCGG CATTGCGTTG GATCAGCGCG GCACTGGTCG CCACTGGAGT CACCGCGGCA
TGGAGCAGCC ATGCTTTCGC GGACGTGAAA ATCGGCGTGA CCGTGTCGGC AACGGGTCCT
GCCGCGTCGC TCGGTATACC GGAAAAGAAC ACGATTGCGC TGCTGCCTAA AGAAGTGGCA
GGCCAGAAAA TCGAGTACAT CATGCTCGAC GACGCCACCG ACTCGACTCA GGCCGTCAAG
AACACGCGCA AGCTCACCAG CGAAGATCAC GTGGATGCGC TGATCGGCTC GACCGTGGTG
CCGAACTCGC TGGCCATGAT CGATGTCGCC GCCGAAACCA CCACGCCCAT GATCTCGATG
GCCGCTGCGG CGAGCATCGT CGAACCGATG GATGCGAAGC GCGCGTGGGT CTTCAAGACG
CCGCAGAACG ACATTCTCAT GGCCACCGCG ATCGCGCAGC ATATGTCGAA TCACGGCGTG
AAAACGGTCG CCTTTATCGG CTTCTCGGAC GCTTACGGCG AGAGCTGGTT CAAGGAATTC
AGCAAGGCCG CGGACCTCGC GAAGATCAGG ATCGTCGCGA ACGAACGCTT CGCGCGTAAC
GACGCGTCGG TGACCGGCCA GGTGCTGAAA GTCATGTCGC GGAATCCGGA TGCGGTGCTG
ATCGCGGGCG CGGGCACACC GGCTGCGCTG CCGCAGAAAA CGCTCAAGGA GCGCGGCTAC
AAGGGCAAGT ACTATCAGAC GCACGGCGTC GCCAATAACG ATTTCCTGCG CGTGTGCGGC
AAGGATTGCG AAGGGACTTA TCTGCCGGCC GGCCCGCTGC TCGTTGCCGA TCAACTGCCC
GATTCGAGTC CGGTGAAAAA GAGCGCGCTC GCCTATAAGC GTGCGTATGA AACCGCTTAC
GGTGTCGGCT CGGTGTCGAC CTTCGGCGGG CATGCGTGGG ACGCGGGCCT GCTGCTGCAA
CGCGCGATTC CGCTGGCGCT GAAGAAGGGC CAGCCGGGCA CGCCCGCGTT CCGCGAGGCG
CTGCGTGCAG CGCTGGAAAA CACCAAAGAC ATGCCCGCGT CGCACGGCAT CTTCAACATG
AGCGCGAACG ACCATTCCGG TCTCGACCAG CGGGCGCGCG TCATGGTGGA GATTGTCGGC
GGCAAGTGGA AGTTGTCCGG CGACTGA
|
|---|
| Protein sequence | MKSALRWISA ALVATGVTAA WSSHAFADVK IGVTVSATGP AASLGIPEKN TIALLPKEVA
GQKIEYIMLD DATDSTQAVK NTRKLTSEDH VDALIGSTVV PNSLAMIDVA AETTTPMISM
AAAASIVEPM DAKRAWVFKT PQNDILMATA IAQHMSNHGV KTVAFIGFSD AYGESWFKEF
SKAADLAKIR IVANERFARN DASVTGQVLK VMSRNPDAVL IAGAGTPAAL PQKTLKERGY
KGKYYQTHGV ANNDFLRVCG KDCEGTYLPA GPLLVADQLP DSSPVKKSAL AYKRAYETAY
GVGSVSTFGG HAWDAGLLLQ RAIPLALKKG QPGTPAFREA LRAALENTKD MPASHGIFNM
SANDHSGLDQ RARVMVEIVG GKWKLSGD
|
|---|
| |