| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0021 |
|---|
| Symbol | |
|---|
| ID | 4006406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 4825047 |
|---|
| End bp | 4826018 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637949620 |
|---|
| Product | branched chain amino acid ABC transporter inner membrane protein |
|---|
| Protein accession | YP_560958 |
|---|
| Protein GI | 91785752 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.901563 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAGAA AAGTGCTCTA CGGTCTGCTG CTGATCGTGC TTCTCGCGGT GCCCGTGCTC
GGCATCTATC CGCTCTTCGT GATGAAGGTG ATGTGCTTCG CGTTGTTCGC GGCGGCGTTC
AATCTGCTGA TCGGCTATAC CGGATTGCTG TCGTTCGGCC ACGCCATGTT TCTCGCCTCG
GCGGGCTATG TCACGGGCTA CGCGATGCAG ACGCTCGGCT TCTCGCCGGA GCTCGGCGTG
CTCGCCGGCA CGGCGGCGGC CACCTTGCTC GGGCTGATTG TGGGCATCTT CGCGATTCGC
CGCCAGGGCA TCTACTTTGC GATGGTCACG CTGGCGCTCG CGCAAATGGT CTACTTCGTA
TTCCTGCAGG CGCCGTTCAC GCATGGAGAG GACGGTCTGC AAGGCGTGCC GCGCGGCAAG
CTGTTCGGCG TGCTGGATCT CTCGTCCGAC GTGGCGTTGT ACTTCGTCGT GCTCGCCGTG
ATGGTGCTGG CTTTCCTGCT GATCGTGCGG ATCGTGCATT CGCCGTTCGG ACAGGTGCTG
GTGGCGATCA AGGAGAACGA ACCGCGGGCG GTGTCGCTCG GCTACGATAC GGATCGCTTC
AAGCTGCTCG CCTTCATTCT GTCGGCGGGA ATCGCGGGTC TCGCGGGGTC GCTCAAGGTG
CTGGTGCAAG GGTTCGAAAC ATTGAGCGAC GCGTACTGGA CCATGTCGGG CCTCGTGATC
CTGATGACGC TCGTCGGCGG CATGGGCACG CTGTTCGGAC CGTTGCTCGG CGCGGCGTTG
ATCGTCGCGC TCGAGGACCG GCTGGGCGAT TTCGGCGCGG CGCTCGCGTC GTCGACGGGC
GTGGAGTGGT TCCGCTCGCT GGGGGAATCG GTGACCATCG TGACCGGCAT CATCTTCATT
GCGTGCGTGC TGGCGTTCAG GCGCGGCATT GTCGGCGAGA TCGTCGCGCG AGTGCGGCCG
TTGCGGGCCT GA
|
|---|
| Protein sequence | MQRKVLYGLL LIVLLAVPVL GIYPLFVMKV MCFALFAAAF NLLIGYTGLL SFGHAMFLAS
AGYVTGYAMQ TLGFSPELGV LAGTAAATLL GLIVGIFAIR RQGIYFAMVT LALAQMVYFV
FLQAPFTHGE DGLQGVPRGK LFGVLDLSSD VALYFVVLAV MVLAFLLIVR IVHSPFGQVL
VAIKENEPRA VSLGYDTDRF KLLAFILSAG IAGLAGSLKV LVQGFETLSD AYWTMSGLVI
LMTLVGGMGT LFGPLLGAAL IVALEDRLGD FGAALASSTG VEWFRSLGES VTIVTGIIFI
ACVLAFRRGI VGEIVARVRP LRA
|
|---|
| |