Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A0016 |
Symbol | |
ID | 4006411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 4830181 |
End bp | 4831896 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637949625 |
Product | GMC family oxidoreductase |
Protein accession | YP_560963 |
Protein GI | 91785757 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTATA CCGACACCAC GCCCGAGACT GCCCGGCGGC TCGAAGGCGA GTTCGACTAC ATCATCGTGG GCGCGGGGAC GGCGGGATGT GTGCTGGCCA ATCGCCTGAG CGAAGATCCG GACGTGCAGG TGTTGCTGCT CGAAGCCGGC GGCAAGGACG ATTACCACTG GATTCACGTG CCGGTCGGCT ACCTCTATTG CATCGGCAAT CCGCGCACGG ACTGGCTTTA CAAAACCCAG GCCGAAGCCG GGCTCAATGG CCGCGCGCTT TCGTATCCAC GCGGACGCGT ATTGGGCGGC AGTTCGTCCA TCAACGGCAT GATCTACATG CGTGGTCAGC GCGAAGACTA CGATGAATGG GCGCGAGTCA CCAACGACTC ATCCTGGTCC TGGAACTCAG TGCTGCCCGT CTTCAGGCGT AGCGAAGATC ATTACGCCGG CGCGAGCGAA TCTCATGGCG CGGGCGGCCC TTGGCGCGTC GAGAAACAGC GGTTGAAATG GAAAATTCTC GAAGAGTTTT CGCGTGCGGC GCAAGAGGCC GGCATTCCCG CAACCGACGA CTTCAACCGT GGCGACAACA CCGGCGTCGG CTACTTCGAC GTCAATCAGA AACGCGGCAT TCGCTGGAAC GCGTCGAAGG CATTCTTGCG TCCCGCACTC AAGCGTCCGA ATCTCACGGT CATCACCGGC GCGCACACGC AGCGCGTCGT CTTCGAAGGA CGCCGTTGCA CGGGCGTCGA ATATCGCGGC AACGACACGG ACTATCTGGC CAAGGCTCGC TGCGAAGTGA TCCTGAGCTC GGGGGCCGTC AACTCGCCGC AATTGCTCGA ATTGTCCGGC ATCGGCAATG GCGCGCGTCT GCAGAACCTG GGCATCGAGG TCGTCAACGA TCTGCGTGGC GTCGGAGAGA ATCTACAAGA CCATTTGCAA TTGCGGATGG CTTATAAGGT CGACGGCGTA CGCACGCTCA ACACCGCGTC CGCGCATTGG TGGGGCAAGC TGATGATCGG CCTGCAGTAC GCGCTGTTCC AAAGCGGCCC CATGTCGATG TCGCCGTCGC AACTTGGTGC GTTTGCCAGG TCCGATCCGA ACGATCGCTC GCTCACGCGG CCCGACCTCG AATATCACGT CCAGCCGCTC TCGCTCGATC GCTTCGGCGA ACCGCTGCAT CGGTTCAATG CGTTCACCGC GTCGGTGTGC CAGTTGCGGC CCACTTCGCG CGGCAGCATT CACATCGAAT CGGCCAATGC TTCAGCGCCG CCGTTGATCG CGCCGAACTA TCTCTCCACC GATTACGACC GGCACGTCGC CGCCAACGCA CTGCGTCTCA CGCGGCGCAT TGCCGCGGCG CCGGCGCTTG CACGCTATCG TCCGCAAGAG ATTTTGCCCG GCACTCAGTA CCAGACGGAA GAGGAGTTGC AGCAGGCTGC CGGCGCGGTC GGCACGACCA TCTTCCATCC GGTCGGCACC TGCCGCATGG GCACGACCGA CGACCCCGGC GCGGTGGTCG ACAACCGGCT ACGGGTTATC GGTGTTGACG GACTGCGCGT GGTCGATGCA TCCGTCATGC CGACCATCAC CTCGGGCAAT ACCAATTCGC CCACGCTGAT GATCGCGGAG CGCGCCAGCG ACATGATCCG CGAGGATCGC CGTGCGCGCG TGGCCGCCAG TTCCGTGGCG CAAACCAGCC CGGCGCCTTC AGCATTCGCA GTGTGA
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Protein sequence | MSYTDTTPET ARRLEGEFDY IIVGAGTAGC VLANRLSEDP DVQVLLLEAG GKDDYHWIHV PVGYLYCIGN PRTDWLYKTQ AEAGLNGRAL SYPRGRVLGG SSSINGMIYM RGQREDYDEW ARVTNDSSWS WNSVLPVFRR SEDHYAGASE SHGAGGPWRV EKQRLKWKIL EEFSRAAQEA GIPATDDFNR GDNTGVGYFD VNQKRGIRWN ASKAFLRPAL KRPNLTVITG AHTQRVVFEG RRCTGVEYRG NDTDYLAKAR CEVILSSGAV NSPQLLELSG IGNGARLQNL GIEVVNDLRG VGENLQDHLQ LRMAYKVDGV RTLNTASAHW WGKLMIGLQY ALFQSGPMSM SPSQLGAFAR SDPNDRSLTR PDLEYHVQPL SLDRFGEPLH RFNAFTASVC QLRPTSRGSI HIESANASAP PLIAPNYLST DYDRHVAANA LRLTRRIAAA PALARYRPQE ILPGTQYQTE EELQQAAGAV GTTIFHPVGT CRMGTTDDPG AVVDNRLRVI GVDGLRVVDA SVMPTITSGN TNSPTLMIAE RASDMIREDR RARVAASSVA QTSPAPSAFA V
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