Gene Bpro_5485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5485 
Symbol 
ID4016444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007950 
Strand
Start bp235579 
End bp235938 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content53% 
IMG OID637945105 
Producttranscription regulator 
Protein accessionYP_552237 
Protein GI91791287 
COG category[K] Transcription 
COG ID[COG5499] Predicted transcription regulator containing HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.184827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC GTCCTATTCA CACGAAGGCT GATTACAAGG CAGCACTTAA AAGAGTCTCT 
ACGCTGGTCG ATGCTGACCC AGCTCGTGGC AGCGCCGAGG GCGATGAATT GGAAGTGCTA
GGTACGCTGG TCGAGGCCTA TGAGGCCCAA CACTTTCCAT TGGAGCTTCC TGATGCTATT
GAGGCCATCA AATTCCGGAT GGAGCAACAG GGACTAGAGC CCAAGGACCT CAAACCAATG
ATCGGAGAAC TCAATCGGGT CTATGAAGTT CTCGCTCGCC GGCGGCCTTT GAGCATTGGA
ATGATTCGGC GCCTCAACGA AGGCATGGGT ATTTCAGCTG AATGCCTGAT CCGCGCCTAA
 
Protein sequence
MNIRPIHTKA DYKAALKRVS TLVDADPARG SAEGDELEVL GTLVEAYEAQ HFPLELPDAI 
EAIKFRMEQQ GLEPKDLKPM IGELNRVYEV LARRRPLSIG MIRRLNEGMG ISAECLIRA