Gene Bpro_5440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5440 
Symbol 
ID4016399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007950 
Strand
Start bp190584 
End bp192440 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content56% 
IMG OID637945060 
Producthypothetical protein 
Protein accessionYP_552192 
Protein GI91791242 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.135644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.335438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTTT TCTCTAAGCT CCGTTCGCGG CTGACGGGCT GTCTGGATCA TGCGTCGGCA 
CCGTGTTGGG CTGCTGTCGC CGTTCCCCTT TTGTTTGCGC TGGCTTCCGT ATTTGTGATC
GGCCAGGATG CGAACTGGGA TCTGCTTAAC TATCACCTCT ATAACGCATA TGCGCTGCTC
AATGGCCGCG TCGGGATTGA CCTAGCACCA GCCGCTATGC AGAGCTATTT CAATCCGGTG
CTGGATCTGC CGTATTTTCT GATGATTCAG CACTGGCCGC CTCGTGCAAT AGCCTTCGCG
ATGGGCTTGT TTCACGGCCT TAATTTTGTG TTTTTGCTTC TGATTGTGAA GCCTTTTGTT
GAGCGTGCGA AACACCCCAA CGCGACGGTG ATTCTGCTCG CGCTGGCCGG GTGCCTGAGT
GCTGTTTTTG TATCGGAACT TGGAAACACC ATGGGCGACA ACACTTCATC GGTGTTTGTG
CTGGCAGGTG TGGCGGTCGC TGTGACCCGA TGGGGTGATG TTGTACGTGC GCGCGGACAC
TACCTGCTGT GGATCATGTT GGCGGGATTG CTGATAGGTA TGGGCGCCGG CGCAAAGCTC
ACAAACGCGG TTTATGCGGT GGCCGGCGCC TTGGCACTTC TGCTGGCCTG TCCCGGCGGC
GCAGTTCATC GGTTGCGCGT CGCATCGGCA TTCAGCGCGG GCGTTGTGCT GGGTATCGCT
TTGACCGGGG GCTACTGGTT TCTCATGCTC TGGGAGCTCT ACGGCAATCC GCTGTTCCCG
CAGTTCAATA CCTATTTCCA GTCGGACATG GCTGGCTCGA TCGGTGTGGG CGACACTCGC
TGGCGGCCGA AGGGTGTAGC TGAAGCGCTT TTTTTCCCAT TTATATTTGC GCTGAATCCA
GCGCGGGTTG GTGAGTCGGC GCTTTATCAG ATTGCACTGC CTGTGCTGTA CTCATTGTTC
GCGCTCTGGG CCATCGCAGC AATTCGTACC CGATTTTTCA GCTTATCACC AGCCCGGAAT
GCTTATGTTT TCCCTCTTGA AGAACCCTCG AGGGCACATT TTCTGCTGGC ATTTGCTGCT
ACAAGTTACC TGACTTGGCT CGGCATTTTC AGCATTCACC GCTACCTGGT GCCGCTGGAA
ATGATTGCGC CGTTGGCAAT CTGGCTTTTG TTGCATCGGC TCTTCAAGCC AGCTTTGGCA
CAATCGCTTG GCAAAAAGGT ACTGCTTTCC TCGGTGATTG TTGTATTGCT ATTCCGGACA
ACATGGGGCA ATGTTGGCTT TGGCGAAACC GCTTTCCGGG TTGAGCTGCC GCCGCTGGCT
CAACCGGAAA AAACTGCTGT CATGATATTG CAGGGCGGTA AGCATGCCTG GTTGATCCCG
TTTTTCCCGC CTGAAATCGA AGTCGCCTCG CTGGCAAGTT TCCCCGAGTC GCCGAAATTT
GTGTCCCAGG CCATGCGGAT GATCGACAGC CGGTCAGAGA ATGCCTATGT TATTTTCGAA
GCAAGCAAGG ACACACAGCC TGCACAAATC GCAAAAATCA ATCGCGTTCT TGCCAGTATG
GGTGTGGGCA AGAGCGGTTT CGGCTGCGAT GTTGTACGTT GGGGTCTCAA GCGAAATTCC
CGCCTGAACG CCAAGATGTC CGACAGCAGC AACGGCGCGT ACTGCGGTGT CGTGATGGAT
TCCGCAGCGC GGCGCGACCT GGCTGAGGAG GACAAGGCCA TTGCGCGCGC CAGTGATGAA
CTTGCAAAAA CACGTTACGG CTTGCGCGTC GATCTGGCAT CTTGTGTGAC GTACCGTGCT
TGGGTGGGCA ACCACCAGGA CGGCTACCAG TACTGCCGTA TTTCCCGCCA GTCGTGA
 
Protein sequence
MGFFSKLRSR LTGCLDHASA PCWAAVAVPL LFALASVFVI GQDANWDLLN YHLYNAYALL 
NGRVGIDLAP AAMQSYFNPV LDLPYFLMIQ HWPPRAIAFA MGLFHGLNFV FLLLIVKPFV
ERAKHPNATV ILLALAGCLS AVFVSELGNT MGDNTSSVFV LAGVAVAVTR WGDVVRARGH
YLLWIMLAGL LIGMGAGAKL TNAVYAVAGA LALLLACPGG AVHRLRVASA FSAGVVLGIA
LTGGYWFLML WELYGNPLFP QFNTYFQSDM AGSIGVGDTR WRPKGVAEAL FFPFIFALNP
ARVGESALYQ IALPVLYSLF ALWAIAAIRT RFFSLSPARN AYVFPLEEPS RAHFLLAFAA
TSYLTWLGIF SIHRYLVPLE MIAPLAIWLL LHRLFKPALA QSLGKKVLLS SVIVVLLFRT
TWGNVGFGET AFRVELPPLA QPEKTAVMIL QGGKHAWLIP FFPPEIEVAS LASFPESPKF
VSQAMRMIDS RSENAYVIFE ASKDTQPAQI AKINRVLASM GVGKSGFGCD VVRWGLKRNS
RLNAKMSDSS NGAYCGVVMD SAARRDLAEE DKAIARASDE LAKTRYGLRV DLASCVTYRA
WVGNHQDGYQ YCRISRQS