Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5437 |
Symbol | |
ID | 4016396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007950 |
Strand | + |
Start bp | 188601 |
End bp | 189140 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637945057 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_552189 |
Protein GI | 91791239 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.43825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.56373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACGG ACCTCGCCCA GCCATTCTCG ACACCGTCCG AACAATGCAT AGTCCCAGCA TCGACTTATC ACACGGTCAA CCCGTATGTC CTTCGCTCGA TCCTGACCGT GGAATCGGGA CTGAAGTCGA GCGCGATTGG GAAAAACCGG AACGGCTCGG TCGACATTGG GATTGGCCAG ATCAACTCGA TTCACCTGAA AGAGCTCTCG CAATTCGGGA TCGGCCCAAC CCACCTTCAA GATGCCTGCA TCGGGACCTA TGTTGCGGCC TGGCACCTGA AGAAGGCCAT TGCAGAACGG GGCAACACTT GGGAAGGTGT GGCGTCGTAT CACAGCCGCA CGCCGTATTT CAACAAGCGG TATCAGGCCT TGATCGTCAA TGAGATGATC CGAAGTGGTG CCATGCAAGG GCAGCTGCTT CCAGTGCCTC CACTGAATCC CTTAGACCTC GGTGCTAGCG GTTCCCGTGG GGGGTTGAAA GCCGCTGCAG CCGGCGACTC CCAAGGATCG AGCGTCATCA TCTTCGATAC CCGCCAATAA
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Protein sequence | MATDLAQPFS TPSEQCIVPA STYHTVNPYV LRSILTVESG LKSSAIGKNR NGSVDIGIGQ INSIHLKELS QFGIGPTHLQ DACIGTYVAA WHLKKAIAER GNTWEGVASY HSRTPYFNKR YQALIVNEMI RSGAMQGQLL PVPPLNPLDL GASGSRGGLK AAAAGDSQGS SVIIFDTRQ
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