| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5396 |
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| Symbol | |
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| ID | 4016355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | - |
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| Start bp | 153785 |
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| End bp | 155155 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637945016 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_552148 |
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| Protein GI | 91791198 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.476043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTTG GAAGTGCATC GCATCAGAAG CCTGGGAAAC CAGGGCGGGA CACAATTGGC
GCGGGTGAAA CCCCCGTTAA TCTGGCTCGT GATGAAGCAC GTCCGGCGTG TCAACAACAG
GAAGGCTTAG GGCGAGAAAG CTTGCTAACG CAGGTCCTAT CGCGTGAGAA TATGGCAGCG
GCGTGGAAAC GCGTCAAAGC CAATAAGGGT AGTGCAGGCG TCGATGGATT GACGATTGAA
GAAACCCCGG AATATCTTAA AACTCACTGG TCACGAATTC GGCTGGAGCT TTTAAACGGG
ACATATCGGC CTCAAGCCGT GCGCCGCGTT GAAATTCCGA AGCCGACAGG TGGTATGCGG
GAATTAGGTA TTCCGACGGT TCTTGATCGG CTGATTCAGC AGGCTTTGCT GCAAGTTCTG
CAGCCAATGA TTGACCTGAC ATTCTCTGAA TTCAGCTACG GTTTTCGCCC TGGTCGGAGT
GCGCATGATG CTGTGCTGCA AGCTCAGCGG TATGTGCAGG AAGGCTTCCA GGTAGTGGTC
GATGTGGACT TGGAGAAGTT CTTTGATCGG GTCAATCACG ACATCCTCAT GGACAGGCTT
GCTAAACGCA TTGCCGACAA GGCCGTTCTG CGGCTGATTC GACAATACTT GCAAGCAGGG
ATTATGGCGG GTGGTGTGGT TATGGATAGG TCGGAAGGAA CGCCGCAAGG TGGGCCTCTC
TCGCCTCTCC TGGCCAACGT GCTGTTGGAT GAAGTGGATC TAGACCTGCA AAGGCGGGGG
CATCGCTTTG CACGCTATGC GGATGATTGC AACGTTTACG TGCGCAGTCA GAAGGCGGGC
GAGCGAGTGT TGTTGTCGCT GAGAAAGCTT TACGAAAAGC TTCACCTGAA GGTGAACGAG
AAGAAAACCG AAGTGGGACC GGTCTTTGGC CGCAAGTTCC TTGGCTACTG CCTACGGCGA
TGGTCAAAGG ACACGGTAAA GATTGCTGTC GCACCCAAGG CGCTCGACAC GTTCAAGCAA
CGCATCCGGC TCATCACAAA ACGGGTTGGT GGCAAAGGCA TGGTTCAGAT CGCGGAACAA
ATGAAGGAGT ACCTGCCGGG TTGGAAGTCT TACTTTCGGC TCGCGCAAAC ACCTCAGACG
TTCAAAGATT TGGATTCATG GACGCGACAC CGGCTCCGTG CTATCCAGCT CAAGCATTGG
CGTGTTGGAA CGACTGTTTA CAGTCGCCTG AGAAGCCTCG GTGCTAAACA TGAGTTGGCC
GCACAAATTG CTGGTGGTGC TGGGCACTGG TGGGGACATA GCGAAGTGGG CCTGAATCGC
GTCCTCACCG TCAAATACTT CGACGACCTT GGGATACCTA GACTCACATG A
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| Protein sequence | MTLGSASHQK PGKPGRDTIG AGETPVNLAR DEARPACQQQ EGLGRESLLT QVLSRENMAA
AWKRVKANKG SAGVDGLTIE ETPEYLKTHW SRIRLELLNG TYRPQAVRRV EIPKPTGGMR
ELGIPTVLDR LIQQALLQVL QPMIDLTFSE FSYGFRPGRS AHDAVLQAQR YVQEGFQVVV
DVDLEKFFDR VNHDILMDRL AKRIADKAVL RLIRQYLQAG IMAGGVVMDR SEGTPQGGPL
SPLLANVLLD EVDLDLQRRG HRFARYADDC NVYVRSQKAG ERVLLSLRKL YEKLHLKVNE
KKTEVGPVFG RKFLGYCLRR WSKDTVKIAV APKALDTFKQ RIRLITKRVG GKGMVQIAEQ
MKEYLPGWKS YFRLAQTPQT FKDLDSWTRH RLRAIQLKHW RVGTTVYSRL RSLGAKHELA
AQIAGGAGHW WGHSEVGLNR VLTVKYFDDL GIPRLT
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